RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 FAM90A26D6RGX4 464 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 PSG1P11464 419 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 ANXA3P12429 323 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 HLA-DMBP28068 263 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 OR1S1Q8NH92 325 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 HRH4Q9H3N8 390 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 SHPKQ9UHJ6 478 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 X6R8D5 127 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 DNAH10Q8IVF4 4471 aa15.21■□□□□ 0.03
SYNE4-205ENST00000490730 ZNF705EA8MWA4 302 aaPredicted RBP15.2■□□□□ 0.02
SYNE4-205ENST00000490730 SUPT4H1P63272 117 aaKnown RBP15.2■□□□□ 0.02
SYNE4-205ENST00000490730 KLF9Q13886 244 aaPredicted RBP15.2■□□□□ 0.02
SYNE4-205ENST00000490730 RNF125Q96EQ8 232 aa15.2■□□□□ 0.02
SYNE4-205ENST00000490730 BCL7BQ9BQE9 202 aa15.2■□□□□ 0.02
SYNE4-205ENST00000490730 VPS13DQ5THJ4 4388 aa15.2■□□□□ 0.02
SYNE4-205ENST00000490730 ZFP92A6NM28 416 aa15.19■□□□□ 0.02
SYNE4-205ENST00000490730 BUB3O43684 328 aa15.19■□□□□ 0.02
SYNE4-205ENST00000490730 TNFSF8P32971 234 aa15.19■□□□□ 0.02
SYNE4-205ENST00000490730 SRPXP78539 464 aa15.19■□□□□ 0.02
SYNE4-205ENST00000490730 Q6ZTC4 211 aa15.19■□□□□ 0.02
SYNE4-205ENST00000490730 TMED4Q7Z7H5 227 aa15.19■□□□□ 0.02
SYNE4-205ENST00000490730 MCFD2Q8NI22 146 aa15.19■□□□□ 0.02
SYNE4-205ENST00000490730 SLIRPQ9GZT3 109 aaKnown RBP15.19■□□□□ 0.02
SYNE4-205ENST00000490730 ELOA3CA0A087WX78 387 aaPredicted RBP15.18■□□□□ 0.02
SYNE4-205ENST00000490730 TCTAP57738 103 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 NUTF2P61970 127 aaKnown RBP15.18■□□□□ 0.02
SYNE4-205ENST00000490730 PRR20EP86478 221 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 PRR20CP86479 221 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 PRR20DP86480 221 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 PRR20BP86481 221 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 PRR20AP86496 221 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 CSNK1G2-AS1Q8NCQ2 148 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 SLC35E1Q96K37 410 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 XCL2Q9UBD3 114 aa15.18■□□□□ 0.02
SYNE4-205ENST00000490730 PAIP2BQ9ULR5 123 aaKnown RBP15.18■□□□□ 0.02
SYNE4-205ENST00000490730 H3BMQ9 156 aa15.17■□□□□ 0.02
SYNE4-205ENST00000490730 FAUP35544 74 aaKnown RBP15.17■□□□□ 0.02
SYNE4-205ENST00000490730 NUP62P37198 522 aaPredicted RBP15.17■□□□□ 0.02
SYNE4-205ENST00000490730 C1QTNF4Q9BXJ3 329 aa15.17■□□□□ 0.02
SYNE4-205ENST00000490730 PFDN2Q9UHV9 154 aa15.17■□□□□ 0.02
SYNE4-205ENST00000490730 APLNQ9ULZ1 77 aa15.17■□□□□ 0.02
SYNE4-205ENST00000490730 TRAV10A0A0B4J240 114 aa15.16■□□□□ 0.02
SYNE4-205ENST00000490730 ZNF90Q03938 601 aa15.16■□□□□ 0.02
SYNE4-205ENST00000490730 GAMTQ14353 236 aa15.16■□□□□ 0.02
SYNE4-205ENST00000490730 PYDC2Q56P42 97 aa15.16■□□□□ 0.02
SYNE4-205ENST00000490730 ZNF767PQ75MW2 155 aa15.16■□□□□ 0.02
SYNE4-205ENST00000490730 H3BMM0 161 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 IGKV3-20P01619 116 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 IAPPP10997 89 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 VAMP1P23763 118 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 GPX4P36969 197 aaPredicted RBP15.15■□□□□ 0.02
SYNE4-205ENST00000490730 LYZP61626 148 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 PPP1R14BQ96C90 147 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 LINC00052Q96N35 136 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 SOSTQ9BQB4 213 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 SEPSECSQ9HD40 501 aaKnown RBP15.15■□□□□ 0.02
SYNE4-205ENST00000490730 CELA1Q9UNI1 258 aa15.15■□□□□ 0.02
SYNE4-205ENST00000490730 FABP1P07148 127 aa15.14■□□□□ 0.01
SYNE4-205ENST00000490730 ATP5IP56385 69 aaPredicted RBP15.14■□□□□ 0.01
SYNE4-205ENST00000490730 OR2F1Q13607 317 aa15.14■□□□□ 0.01
SYNE4-205ENST00000490730 OR8G2PQ6IF36 304 aa15.14■□□□□ 0.01
SYNE4-205ENST00000490730 TOMM5Q8N4H5 51 aa15.14■□□□□ 0.01
SYNE4-205ENST00000490730 DNAH6Q9C0G6 4158 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 IGHV4-4A0A075B6R2 117 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 IGKV1D-37A0A075B6S9 117 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 PIGBOS1A0A0B4J2F0 54 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 HLA-DRB4P13762 266 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 AP3S2P59780 193 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 DEFB1P60022 68 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 RAB11AP62491 216 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 COQ8AQ8NI60 647 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 WDR12Q9GZL7 423 aaKnown RBP15.13■□□□□ 0.01
SYNE4-205ENST00000490730 HLA-DRB4X5D2U9 266 aa15.13■□□□□ 0.01
SYNE4-205ENST00000490730 DUXBA0A1W2PPF3 345 aa15.12■□□□□ 0.01
SYNE4-205ENST00000490730 ID1P41134 155 aa15.12■□□□□ 0.01
SYNE4-205ENST00000490730 NKX2-1P43699 371 aaPredicted RBP15.12■□□□□ 0.01
SYNE4-205ENST00000490730 FXYD7P58549 80 aa15.12■□□□□ 0.01
SYNE4-205ENST00000490730 TMEM128Q5BJH2 165 aa15.12■□□□□ 0.01
SYNE4-205ENST00000490730 GDF5OSQ5U4N7 250 aa15.12■□□□□ 0.01
SYNE4-205ENST00000490730 GSG1LQ6UXU4 331 aa15.12■□□□□ 0.01
SYNE4-205ENST00000490730 IGHV3OR16-12A0A075B7B8 117 aa15.11■□□□□ 0.01
SYNE4-205ENST00000490730 SNRPGP15A8MWD9 76 aa15.11■□□□□ 0.01
SYNE4-205ENST00000490730 C12orf74Q32Q52 190 aa15.11■□□□□ 0.01
SYNE4-205ENST00000490730 TRIM63Q969Q1 353 aa15.11■□□□□ 0.01
SYNE4-205ENST00000490730 DEFB131BA0A096LNP1 70 aa15.1■□□□□ 0.01
SYNE4-205ENST00000490730 PITX3O75364 302 aa15.1■□□□□ 0.01
SYNE4-205ENST00000490730 OR8I2Q8N0Y5 310 aa15.1■□□□□ 0.01
SYNE4-205ENST00000490730 OR4B1Q8NGF8 309 aa15.1■□□□□ 0.01
SYNE4-205ENST00000490730 MAGT1Q9H0U3 335 aa15.1■□□□□ 0.01
SYNE4-205ENST00000490730 HECTD4Q9Y4D8 3996 aa15.09■□□□□ 0.01
SYNE4-205ENST00000490730 CCDC160A6NGH7 325 aa15.09■□□□□ 0.01
SYNE4-205ENST00000490730 MED6O75586 246 aa15.09■□□□□ 0.01
SYNE4-205ENST00000490730 PSMB3P49720 205 aa15.09■□□□□ 0.01
SYNE4-205ENST00000490730 EMP1P54849 157 aa15.09■□□□□ 0.01
SYNE4-205ENST00000490730 C1orf194Q5T5A4 169 aa15.09■□□□□ 0.01
SYNE4-205ENST00000490730 TRGV9Q99603 122 aa15.09■□□□□ 0.01
SYNE4-205ENST00000490730 SAV1Q9H4B6 383 aaPredicted RBP15.09■□□□□ 0.01
SYNE4-205ENST00000490730 PPP1R1AQ13522 171 aa15.08■□□□□ 0
SYNE4-205ENST00000490730 FOXI2Q6ZQN5 318 aa15.08■□□□□ 0
SYNE4-205ENST00000490730 RNF126Q9BV68 326 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms