RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 NUPR1O60356 82 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 CA2P00918 260 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 GYPAP02724 150 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 GRPRP30550 384 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 SEC11AP67812 179 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 MEF2BQ02080 365 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 HIST1H1AQ02539 215 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ARFRP1Q13795 201 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 BVES-AS1Q5T3Y7 98 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 NEGR1Q7Z3B1 354 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 DOLPP1Q86YN1 238 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 KRTAP7-1Q8IUC3 87 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 UMODL1-AS1Q8N2C9 162 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 SCGB1C1Q8TD33 95 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 GPER1Q99527 375 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 JPT2Q9H910 190 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 FGF22Q9HCT0 170 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 SH2D2AQ9NP31 389 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF391Q9UJN7 358 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 BOKQ9UMX3 212 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 MED31Q9Y3C7 131 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 SPCS1Q9Y6A9 102 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 PXMP4Q9Y6I8 212 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 DOCK11Q5JSL3 2073 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 IGKV1-27A0A075B6S5 117 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 A0A0U1RQV1 116 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 IGSF23A1L1A6 192 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 H0Y980 276 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 HMGN4O00479 90 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 PITX3O75364 302 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 GPR75O95800 540 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 FABP2P12104 132 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 ALOX5APP20292 161 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 NPY1RP25929 384 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 PSMB3P49720 205 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 RPL23P62829 140 aaKnown RBP2.08□□□□□ -2.08
UBXN4-208ENST00000490163 ARG2P78540 354 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 DEFB103AP81534 67 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF117Q03924 483 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 FMODQ06828 376 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 PLCXD2Q0VAA5 305 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 Q56UQ5 140 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 GLYATL3Q5SZD4 288 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 OLIG3Q7RTU3 272 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 OR51A4Q8NGJ6 313 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 OR10AG1Q8NH19 301 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 OR4A5Q8NH83 315 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 RPS4Y2Q8TD47 263 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 KLK6Q92876 244 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 WFDC6Q9BQY6 131 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 RTBDNQ9BSG5 229 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-208ENST00000490163 NPVFQ9HCQ7 196 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 CCL28Q9NRJ3 127 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 CYSLTR1Q9Y271 337 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 ARL2-SNX15V9GYD0 113 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 DOCK6Q96HP0 2047 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 TNRC6AQ8NDV7 1962 aaKnown RBP2.08□□□□□ -2.08
UBXN4-208ENST00000490163 SCN2AQ99250 2005 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 TRAV1-1A0A0B4J248 108 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 TRAV38-1A0A0B4J264 116 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 MYBPHLA2RUH7 354 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 H3BUT2 72 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 FCN1O00602 326 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 CDC42EP2O14613 210 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 HBZP02008 142 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 GPX1P07203 203 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 RHOCP08134 193 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 C3orf79P0CE67 100 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 HIST1H1EP10412 219 aaKnown RBP2.08□□□□□ -2.08
UBXN4-208ENST00000490163 TAS2R46P59540 309 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 NANOS3P60323 173 aaKnown RBP2.08□□□□□ -2.08
UBXN4-208ENST00000490163 KRTAP10-11P60412 298 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 GNG3P63215 75 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF90Q03938 601 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 IL15RAQ13261 267 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 ABCA11PQ4W5N1 156 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 FAM78AQ5JUQ0 283 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 ZIC4Q8N9L1 334 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 MAPK1IP1LQ8NDC0 245 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 OR10G6Q8NH81 332 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 LMX1AQ8TE12 382 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 TMEM230Q96A57 120 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 DDIT4LQ96D03 193 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 Q96M85 177 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 GPR82Q96P67 336 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 SPIN2AQ99865 258 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 OPRPNQ99935 248 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-208ENST00000490163 SPIN2BQ9BPZ2 258 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 EFCAB11Q9BUY7 163 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 PECRQ9BY49 303 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 WDR61Q9GZS3 305 aaKnown RBP2.08□□□□□ -2.08
UBXN4-208ENST00000490163 BCL2L10Q9HD36 194 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 KIAA2026Q5HYC2 2103 aa2.08□□□□□ -2.08
UBXN4-208ENST00000490163 IGLV3-10A0A075B6K4 115 aa2.07□□□□□ -2.08
UBXN4-208ENST00000490163 TRAV27A0A087WT01 109 aa2.07□□□□□ -2.08
UBXN4-208ENST00000490163 EPOPA6NHQ4 379 aa2.07□□□□□ -2.08
UBXN4-208ENST00000490163 H7C1C5 153 aa2.07□□□□□ -2.08
UBXN4-208ENST00000490163 M0R2Z0 102 aa2.07□□□□□ -2.08
UBXN4-208ENST00000490163 ANGPTL7O43827 346 aa2.07□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF324O75467 553 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms