RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 VSIRQ9H7M9 311 aa13.18□□□□□ -0.3
ERCC3-207ENST00000490062 MLXQ9UH92 298 aa13.18□□□□□ -0.3
ERCC3-207ENST00000490062 CST7O76096 145 aa13.17□□□□□ -0.3
ERCC3-207ENST00000490062 BMI1P35226 326 aa13.17□□□□□ -0.3
ERCC3-207ENST00000490062 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
ERCC3-207ENST00000490062 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
ERCC3-207ENST00000490062 DYNLRB2Q8TF09 96 aa13.17□□□□□ -0.3
ERCC3-207ENST00000490062 CHAC2Q8WUX2 184 aa13.17□□□□□ -0.3
ERCC3-207ENST00000490062 ZNF256Q9Y2P7 627 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-207ENST00000490062 CHEK1O14757 476 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 CD5P06127 495 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 SELENOTP62341 195 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 ZNF90Q03938 601 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 CD300EQ496F6 205 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-207ENST00000490062 TEPPQ6URK8 271 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 Q6ZNX1 250 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 METTL26Q96S19 204 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 TMEM147Q9BVK8 224 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 AURKAIP1Q9NWT8 199 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-207ENST00000490062 MBD2Q9UBB5 411 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 SLC45A2Q9UMX9 530 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
ERCC3-207ENST00000490062 A0A1W2PS18 150 aa13.15□□□□□ -0.3
ERCC3-207ENST00000490062 IL4P05112 153 aa13.15□□□□□ -0.3
ERCC3-207ENST00000490062 NPPCP23582 126 aa13.15□□□□□ -0.3
ERCC3-207ENST00000490062 PLP1P60201 277 aa13.15□□□□□ -0.3
ERCC3-207ENST00000490062 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-207ENST00000490062 RNF125Q96EQ8 232 aa13.15□□□□□ -0.3
ERCC3-207ENST00000490062 RHPN1-AS1Q9BWJ2 59 aa13.15□□□□□ -0.3
ERCC3-207ENST00000490062 UQCC1Q9NVA1 299 aa13.15□□□□□ -0.3
ERCC3-207ENST00000490062 IGHV3OR16-8A0A075B7F1 116 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 TSPAN4O14817 238 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 GP9P14770 177 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 NUP62P37198 522 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-207ENST00000490062 NHLH2Q02577 135 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 FAM90A2PQ658T7 463 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 BTNL8Q6UX41 500 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 CYP2G1PQ6ZSU1 146 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 TMEM61Q8N0U2 210 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 TMEM217Q8N7C4 229 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
ERCC3-207ENST00000490062 SMCO3A2RU48 225 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
ERCC3-207ENST00000490062 MPDU1O75352 247 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 HNRNPCP07910 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERCC3-207ENST00000490062 RPL12P30050 165 aaKnown RBP13.13□□□□□ -0.31
ERCC3-207ENST00000490062 DEFA6Q01524 100 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 LILRB2Q8N423 598 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 HSPB11Q9Y547 144 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 MEGF8Q7Z7M0 2845 aa13.13□□□□□ -0.31
ERCC3-207ENST00000490062 G3V3Q6 166 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 EIF2B2P49770 351 aaKnown RBP13.12□□□□□ -0.31
ERCC3-207ENST00000490062 PXDC1Q5TGL8 231 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 LAMTOR1Q6IAA8 161 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 TMEM182Q6ZP80 229 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-207ENST00000490062 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 OR5C1Q8NGR4 320 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 NARS2Q96I59 477 aaKnown RBP13.12□□□□□ -0.31
ERCC3-207ENST00000490062 AQP10Q96PS8 301 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 RNF2Q99496 336 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 SPAG8Q99932 426 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-207ENST00000490062 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
ERCC3-207ENST00000490062 BUB3O43684 328 aa13.11□□□□□ -0.31
ERCC3-207ENST00000490062 APOHP02749 345 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-207ENST00000490062 Q5BKY6 102 aa13.11□□□□□ -0.31
ERCC3-207ENST00000490062 OR2T35Q8NGX2 323 aa13.11□□□□□ -0.31
ERCC3-207ENST00000490062 ST8SIA2Q92186 375 aa13.11□□□□□ -0.31
ERCC3-207ENST00000490062 MGST2Q99735 147 aa13.11□□□□□ -0.31
ERCC3-207ENST00000490062 TRAV2A0A0B4J234 112 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 K7EIL1 84 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 AGPAT2O15120 278 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 PRR20EP86478 221 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 PRR20CP86479 221 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 PRR20DP86480 221 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 PRR20BP86481 221 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 PRR20AP86496 221 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 OR2F1Q13607 317 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 RAB31Q13636 194 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 C16orf54Q6UWD8 224 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 GRAMD2BQ96HH9 432 aa13.1□□□□□ -0.31
ERCC3-207ENST00000490062 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-207ENST00000490062 DFFBO76075 338 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 S100A7P31151 101 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 RPL29P47914 159 aaKnown RBP13.09□□□□□ -0.31
ERCC3-207ENST00000490062 LYZP61626 148 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 OPCMLQ14982 345 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 RBPMS2Q6ZRY4 209 aaKnown RBP13.09□□□□□ -0.31
ERCC3-207ENST00000490062 Q8N1Y9 231 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 PRR25Q96S07 402 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 ATP5SQ99766 215 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 NEURL2Q9BR09 285 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms