RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 IGKV1D-37A0A075B6S9 117 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 ELOA3CA0A087WX78 387 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 FABP12A6NFH5 140 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 FAM90A26D6RGX4 464 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 IFNA10P01566 189 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 IFNA4P05014 189 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 AP2S1P53680 142 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 PSMG4Q5JS54 123 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 NOXA1Q86UR1 476 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 LGI3Q8N145 548 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 SCGB3A2Q96PL1 93 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 MCUBQ9NWR8 336 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 APLNQ9ULZ1 77 aa14.04□□□□□ -0.16
TNFRSF1B-202ENST00000489921 PITX3O75364 302 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 MIFP14174 115 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 KLF9Q13886 244 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 GAMTQ14353 236 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 OR51G1Q8NGK1 321 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 C2CD4CQ8TF44 421 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 TRIM63Q969Q1 353 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 SEPSECSQ9HD40 501 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 NRN1Q9NPD7 142 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 DNAH2Q9P225 4427 aa14.03□□□□□ -0.16
TNFRSF1B-202ENST00000489921 EIF2B2P49770 351 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1B-202ENST00000489921 ZNF90Q03938 601 aa14.02□□□□□ -0.17
TNFRSF1B-202ENST00000489921 SIGLEC15Q6ZMC9 328 aa14.02□□□□□ -0.17
TNFRSF1B-202ENST00000489921 H3BMM0 161 aa14.01□□□□□ -0.17
TNFRSF1B-202ENST00000489921 MCFD2Q8NI22 146 aa14.01□□□□□ -0.17
TNFRSF1B-202ENST00000489921 RNF125Q96EQ8 232 aa14.01□□□□□ -0.17
TNFRSF1B-202ENST00000489921 HLA-DMBP28068 263 aa14□□□□□ -0.17
TNFRSF1B-202ENST00000489921 GPX4P36969 197 aaPredicted RBP14□□□□□ -0.17
TNFRSF1B-202ENST00000489921 Q6ZTC4 211 aa14□□□□□ -0.17
TNFRSF1B-202ENST00000489921 TBC1D24Q9ULP9 559 aa14□□□□□ -0.17
TNFRSF1B-202ENST00000489921 V9GYH0 126 aa14□□□□□ -0.17
TNFRSF1B-202ENST00000489921 C11orf94C9JXX5 98 aa13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 ATP5IP56385 69 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 TCTAP57738 103 aa13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 SRPXP78539 464 aa13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 GDF5OSQ5U4N7 250 aa13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 OR1S1Q8NH92 325 aa13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 WDR12Q9GZL7 423 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 CELA1Q9UNI1 258 aa13.99□□□□□ -0.17
TNFRSF1B-202ENST00000489921 IGKV1OR2-108A0A075B7D4 117 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 IGLL5B9A064 214 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 ANXA3P12429 323 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 DEFB1P60022 68 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 SNRPD3P62318 126 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 ZNF79Q15937 498 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 TMEM128Q5BJH2 165 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 GSG1LQ6UXU4 331 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 LRTM2Q8N967 370 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 HERC2O95714 4834 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 FAT2Q9NYQ8 4349 aa13.98□□□□□ -0.17
TNFRSF1B-202ENST00000489921 DUXBA0A1W2PPF3 345 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 SOCS3O14543 225 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 HLA-DRB4P13762 266 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 OR8G2PQ6IF36 304 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 TMED4Q7Z7H5 227 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 PBDC1Q9BVG4 233 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 XCL2Q9UBD3 114 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 HLA-DRB4X5D2U9 266 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 DNAH17Q9UFH2 4485 aa13.97□□□□□ -0.17
TNFRSF1B-202ENST00000489921 ZFP92A6NM28 416 aa13.96□□□□□ -0.17
TNFRSF1B-202ENST00000489921 PRSS46E5RG02 174 aa13.96□□□□□ -0.17
TNFRSF1B-202ENST00000489921 SLC25A6P12236 298 aa13.96□□□□□ -0.17
TNFRSF1B-202ENST00000489921 NKX2-1P43699 371 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1B-202ENST00000489921 C12orf74Q32Q52 190 aa13.96□□□□□ -0.17
TNFRSF1B-202ENST00000489921 IAPPP10997 89 aa13.95□□□□□ -0.18
TNFRSF1B-202ENST00000489921 PYDC2Q56P42 97 aa13.95□□□□□ -0.18
TNFRSF1B-202ENST00000489921 TOMM5Q8N4H5 51 aa13.95□□□□□ -0.18
TNFRSF1B-202ENST00000489921 C17orf77Q96MU5 243 aa13.95□□□□□ -0.18
TNFRSF1B-202ENST00000489921 TRAV10A0A0B4J240 114 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 NOL3O60936 208 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 FAUP35544 74 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 PPP1R1AQ13522 171 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 C1orf194Q5T5A4 169 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 ZNF705AQ6ZN79 300 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 ZNF767PQ75MW2 155 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 THAP8Q8NA92 274 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 SLC35E1Q96K37 410 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 TRGV9Q99603 122 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 C1QTNF4Q9BXJ3 329 aa13.94□□□□□ -0.18
TNFRSF1B-202ENST00000489921 IGHV4-4A0A075B6R2 117 aa13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 ZNF705FA8MVS1 300 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 SFT2D2O95562 160 aa13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 ZNF705DP0CH99 300 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 ZNF705BP0CI00 300 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 LYZP61626 148 aa13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 NUTF2P61970 127 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 OR2F1Q13607 317 aa13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 CCDC190Q86UF4 302 aa13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 ZNF709Q8N972 641 aa13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 SLC25A21Q9BQT8 299 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 SCRT1Q9BWW7 348 aa13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 SAV1Q9H4B6 383 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1B-202ENST00000489921 SNRPGP15A8MWD9 76 aa13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 VAMP1P23763 118 aa13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 NUP62P37198 522 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 AP3S2P59780 193 aa13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 TMEM182Q6ZP80 229 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms