RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 TMEM230Q96A57 120 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 TP53RKQ96S44 253 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 RNF2Q99496 336 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 TMEM222Q9H0R3 208 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 VSIRQ9H7M9 311 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 NAA60Q9H7X0 242 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 SEPSECSQ9HD40 501 aaKnown RBP5.2□□□□□ -1.58
COL9A1-209ENST00000489861 PGPEP1Q9NXJ5 209 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 RABAC1Q9UI14 185 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 CELA1Q9UNI1 258 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 IGKV3-7A0A075B6H7 116 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 ELOA3CA0A087WX78 387 aaPredicted RBP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 IGHV3-21A0A0B4J1V1 117 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 DUXBA0A1W2PPF3 345 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 FABP12A6NFH5 140 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 ZNF207O43670 478 aaKnown RBP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 CLN5O75503 358 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 IGKV1-39P01597 117 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 IGKV1-5P01602 117 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 IGKV1D-39P04432 117 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 FABP1P07148 127 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 OR5AC1P0C628 307 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 PI3P19957 117 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 NPY1RP25929 384 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 FUSP35637 526 aaKnown RBP eCLIP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 RPP30P78346 268 aaKnown RBP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 C12orf74Q32Q52 190 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 RNF212Q495C1 297 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 SAMD13Q5VXD3 122 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 FAM90A2PQ658T7 463 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 Q6ZSN1 163 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 APRG1Q8IVJ8 170 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 OR1S2Q8NGQ3 325 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 OR4X1Q8NH49 305 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 MARCH1Q8TCQ1 289 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 Q8WTZ3 238 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 NAA50Q9GZZ1 169 aaKnown RBP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 ZFAND3Q9H8U3 227 aa5.19□□□□□ -1.58
COL9A1-209ENST00000489861 HEYLQ9NQ87 328 aaPredicted RBP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 PUS1Q9Y606 427 aaKnown RBP eCLIP5.19□□□□□ -1.58
COL9A1-209ENST00000489861 A0A0B4J293 547 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 TMEM189A5PLL7 270 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 CRYM-AS1A6NIL9 109 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 CEBPZOSA8MTT3 80 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 F8W735 103 aaPredicted RBP5.18□□□□□ -1.58
COL9A1-209ENST00000489861 MED6O75586 246 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 TMEM50AO95807 157 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 P0C879 139 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 SULT1A3P0DMM9 295 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 SULT1A4P0DMN0 295 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 AKR1C4P17516 323 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 CCR6P51684 374 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 DEFB131AP59861 70 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 AARDQ4LEZ3 155 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 C2orf83Q53S99 150 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 TMEM268Q5VZI3 342 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 TOMM20LQ6UXN7 152 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 LGI3Q8N145 548 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 SLC24A4Q8NFF2 622 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 STXBP6Q8NFX7 210 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 MCFD2Q8NI22 146 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 DYNC2LI1Q8TCX1 351 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 MS4A6AQ9H2W1 248 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 MCUBQ9NWR8 336 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 GPR132Q9UNW8 380 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 U3KQ87 197 aa5.18□□□□□ -1.58
COL9A1-209ENST00000489861 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 DNAH8Q96JB1 4490 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 A0A0B4J2A0 478 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 NBDYA0A0U1RRE5 68 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 ANKRD20A5PA0PJZ0 165 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 CCDC160A6NGH7 325 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 DBX1A6NMT0 343 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 CTDSP2O14595 271 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 HNRNPCP07910 306 aaKnown RBP eCLIP5.17□□□□□ -1.58
COL9A1-209ENST00000489861 RNASE2P10153 161 aaKnown RBP5.17□□□□□ -1.58
COL9A1-209ENST00000489861 ETV6P41212 452 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 P2RY1P47900 373 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 INPP1P49441 399 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 YPEL3P61236 119 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-209ENST00000489861 SPCS2Q15005 226 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 SP6Q3SY56 376 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 TOMM5Q8N4H5 51 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 GBGT1Q8N5D6 347 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 OR4D10Q8NGI6 311 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 OR51S1Q8NGJ8 323 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 OR4C16Q8NGL9 310 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 GLYATL2Q8WU03 294 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 SLC25A21Q9BQT8 299 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-209ENST00000489861 RTBDNQ9BSG5 229 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-209ENST00000489861 MIXL1Q9H2W2 232 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 CACNG5Q9UF02 275 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 SHPKQ9UHJ6 478 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 TMEM56-RWDD3S4R434 201 aa5.17□□□□□ -1.58
COL9A1-209ENST00000489861 IGHV3OR16-8A0A075B7F1 116 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 A0A1B0GU03 582 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 SMIM9A6NGZ8 99 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 FAM229AH3BQW9 127 aa5.16□□□□□ -1.58
COL9A1-209ENST00000489861 K7EQG2 157 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms