RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 THAP6Q8TBB0 222 aa11.75□□□□□ -0.53
SMIM11A-206ENST00000489469 NARS2Q96I59 477 aaKnown RBP11.75□□□□□ -0.53
SMIM11A-206ENST00000489469 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
SMIM11A-206ENST00000489469 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
SMIM11A-206ENST00000489469 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 IGHV7-4-1A0A0J9YVY3 117 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 IGSF23A1L1A6 192 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 H0YIZ8 118 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 CST7O76096 145 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 ADAMTSL5Q6ZMM2 481 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 LILRB2Q8N423 598 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 METTL26Q96S19 204 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 TMEM231Q9H6L2 316 aa11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 ZNF256Q9Y2P7 627 aaPredicted RBP11.74□□□□□ -0.53
SMIM11A-206ENST00000489469 IGHV3OR16-8A0A075B7F1 116 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 TRAV25A0A0B4J276 109 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 A0A1W2PS18 150 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 IL4P05112 153 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 CD5P06127 495 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 PSG1P11464 419 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 LYL1P12980 280 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 NPPCP23582 126 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 SELENOTP62341 195 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 ARL16Q0P5N6 197 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 DEFB114Q30KQ6 69 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 TEPPQ6URK8 271 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 HAPLN4Q86UW8 402 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 WDR89Q96FK6 387 aaPredicted RBP11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 RNF126Q9BV68 326 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 TMEM147Q9BVK8 224 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 MBD2Q9UBB5 411 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 SMPXQ9UHP9 88 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 PFDN2Q9UHV9 154 aa11.73□□□□□ -0.53
SMIM11A-206ENST00000489469 IGKV1OR2-108A0A075B7D4 117 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 CRYBB3P26998 211 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 S100A7P31151 101 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 KRTAP10-11P60412 298 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 RAB31Q13636 194 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 CD300EQ496F6 205 aaPredicted RBP11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 LAMTOR1Q6IAA8 161 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 BPIFCQ8NFQ6 507 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 UQCC1Q9NVA1 299 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 MLXQ9UH92 298 aa11.72□□□□□ -0.53
SMIM11A-206ENST00000489469 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 HNRNPCP07910 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 EDN2P20800 178 aa11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 ZNF90Q03938 601 aa11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 BTNL8Q6UX41 500 aa11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 RBPMS2Q6ZRY4 209 aaKnown RBP11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 RABAC1Q9UI14 185 aa11.71□□□□□ -0.53
SMIM11A-206ENST00000489469 CHEK1O14757 476 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 GP9P14770 177 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 DEFA6Q01524 100 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 NHLH2Q02577 135 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 CYP2G1PQ6ZSU1 146 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 ZNF546Q86UE3 836 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 OR5C1Q8NGR4 320 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 AURKAIP1Q9NWT8 199 aaPredicted RBP11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 LSM4Q9Y4Z0 139 aaKnown RBP11.7□□□□□ -0.54
SMIM11A-206ENST00000489469 MPDU1O75352 247 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 EIF2B2P49770 351 aaKnown RBP11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 LYZP61626 148 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 OR2F1Q13607 317 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 USF2Q15853 346 aaPredicted RBP11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 Q6ZNX1 250 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 S100A7AQ86SG5 101 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 OR2T35Q8NGX2 323 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 PBDC1Q9BVG4 233 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 WDR83OSQ9Y284 106 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 HSPB11Q9Y547 144 aa11.69□□□□□ -0.54
SMIM11A-206ENST00000489469 TSPAN4O14817 238 aa11.68□□□□□ -0.54
SMIM11A-206ENST00000489469 DFFBO76075 338 aa11.68□□□□□ -0.54
SMIM11A-206ENST00000489469 PXDC1Q5TGL8 231 aa11.68□□□□□ -0.54
SMIM11A-206ENST00000489469 ST8SIA2Q92186 375 aa11.68□□□□□ -0.54
SMIM11A-206ENST00000489469 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
SMIM11A-206ENST00000489469 U3KQE9 123 aa11.68□□□□□ -0.54
SMIM11A-206ENST00000489469 IGHV3-49A0A0A0MS15 119 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 UBE2L5PA0A1B0GUS4 154 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 AGPAT2O15120 278 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 CAMLGP49069 296 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 PLP1P60201 277 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 GUCA2BQ16661 112 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 GTSCR1Q86UQ5 136 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 CHAC2Q8WUX2 184 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 PRR25Q96S07 402 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 RNF2Q99496 336 aa11.67□□□□□ -0.54
SMIM11A-206ENST00000489469 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
SMIM11A-206ENST00000489469 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms