RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 USF2Q15853 346 aaPredicted RBP11.74□□□□□ -0.53
LMX1A-204ENST00000489443 OR8G2PQ6IF36 304 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 OR51G1Q8NGK1 321 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 GRAMD2BQ96HH9 432 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 RCHY1Q96PM5 261 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 TM2D3Q9BRN9 247 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 GPN1Q9HCN4 374 aaPredicted RBP11.74□□□□□ -0.53
LMX1A-204ENST00000489443 INMT-MINDY4F8WBC2 141 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
LMX1A-204ENST00000489443 FABP1P07148 127 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 P2RY1P47900 373 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 OR2F1Q13607 317 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 ODF3L2Q3SX64 289 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 GSG1LQ6UXU4 331 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 LINC00322Q6ZN03 302 aaPredicted RBP11.73□□□□□ -0.53
LMX1A-204ENST00000489443 C2orf50Q96LR7 162 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 PBDC1Q9BVG4 233 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 RABAC1Q9UI14 185 aa11.73□□□□□ -0.53
LMX1A-204ENST00000489443 RCL1Q9Y2P8 373 aaKnown RBP11.73□□□□□ -0.53
LMX1A-204ENST00000489443 LSM5Q9Y4Y9 91 aaKnown RBP11.73□□□□□ -0.53
LMX1A-204ENST00000489443 IGKV1OR2-108A0A075B7D4 117 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 SMCO3A2RU48 225 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 METTL15P1P0C7V9 234 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 ACOT7LQ6ZUV0 252 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 THAP8Q8NA92 274 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 CITED4Q96RK1 184 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 TRGV9Q99603 122 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 U3KQE9 123 aa11.72□□□□□ -0.53
LMX1A-204ENST00000489443 HUWE1Q7Z6Z7 4374 aaKnown RBP11.72□□□□□ -0.53
LMX1A-204ENST00000489443 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 SNRPGP15A8MWD9 76 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 L7N2F9 121 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 CCNKO75909 580 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 TAS2R30P59541 319 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 LYZP61626 148 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 VAMP2P63027 116 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 TMEM14EPQ6UXP3 125 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 APRG1Q8IVJ8 170 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 STXBP6Q8NFX7 210 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 WWC2-AS2Q96NR7 200 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 SPATA25Q9BR10 227 aa11.71□□□□□ -0.53
LMX1A-204ENST00000489443 LOC102724200A0A096LPH7 203 aaPredicted RBP11.7□□□□□ -0.54
LMX1A-204ENST00000489443 K7EPK0 472 aa11.7□□□□□ -0.54
LMX1A-204ENST00000489443 PRAF2O60831 178 aa11.7□□□□□ -0.54
LMX1A-204ENST00000489443 TSC22D2O75157 780 aa11.7□□□□□ -0.54
LMX1A-204ENST00000489443 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
LMX1A-204ENST00000489443 S100A10P60903 97 aa11.7□□□□□ -0.54
LMX1A-204ENST00000489443 RRAS2P62070 204 aaPredicted RBP11.7□□□□□ -0.54
LMX1A-204ENST00000489443 C16orf54Q6UWD8 224 aa11.7□□□□□ -0.54
LMX1A-204ENST00000489443 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
LMX1A-204ENST00000489443 GGTLC1Q9BX51 225 aa11.7□□□□□ -0.54
LMX1A-204ENST00000489443 HELTA6NFD8 242 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 PMS2P5A8MQ11 134 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 EIF2B2P49770 351 aaKnown RBP11.69□□□□□ -0.54
LMX1A-204ENST00000489443 BCAP31P51572 246 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 ZNF124Q15973 351 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 OR10P1Q8NGE3 313 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 GLMPQ8WWB7 406 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 MARVELD1Q9BSK0 173 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 RETNQ9HD89 108 aa11.69□□□□□ -0.54
LMX1A-204ENST00000489443 GOSR2O14653 212 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 BUB3O43684 328 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 SIX6O95475 246 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 RPL35AP18077 110 aaKnown RBP11.68□□□□□ -0.54
LMX1A-204ENST00000489443 GATA2P23769 480 aaPredicted RBP11.68□□□□□ -0.54
LMX1A-204ENST00000489443 DLK1P80370 383 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 FAM24BQ8N5W8 94 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 MAP6D1Q9H9H5 199 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 MGAT4CQ9UBM8 478 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 PFDN2Q9UHV9 154 aa11.68□□□□□ -0.54
LMX1A-204ENST00000489443 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
LMX1A-204ENST00000489443 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
LMX1A-204ENST00000489443 CAV2P51636 162 aa11.67□□□□□ -0.54
LMX1A-204ENST00000489443 AP2S1P53680 142 aaPredicted RBP11.67□□□□□ -0.54
LMX1A-204ENST00000489443 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
LMX1A-204ENST00000489443 RAB32Q13637 225 aa11.67□□□□□ -0.54
LMX1A-204ENST00000489443 BPIFCQ8NFQ6 507 aa11.67□□□□□ -0.54
LMX1A-204ENST00000489443 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
LMX1A-204ENST00000489443 K7EQG2 157 aa11.66□□□□□ -0.54
LMX1A-204ENST00000489443 CFDP00746 253 aaPredicted RBP11.66□□□□□ -0.54
LMX1A-204ENST00000489443 ORM2P19652 201 aa11.66□□□□□ -0.54
LMX1A-204ENST00000489443 NUP62P37198 522 aaPredicted RBP11.66□□□□□ -0.54
LMX1A-204ENST00000489443 DEFB131AP59861 70 aa11.66□□□□□ -0.54
LMX1A-204ENST00000489443 IL15RAQ13261 267 aa11.66□□□□□ -0.54
LMX1A-204ENST00000489443 SIGLEC15Q6ZMC9 328 aa11.66□□□□□ -0.54
LMX1A-204ENST00000489443 TMEM182Q6ZP80 229 aaPredicted RBP11.66□□□□□ -0.54
LMX1A-204ENST00000489443 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
LMX1A-204ENST00000489443 SSNA1O43805 119 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 DEDDO75618 318 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 CST7O76096 145 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 ZNF688P0C7X2 276 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 APOC4P55056 127 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 CYP2G1PQ6ZSU1 146 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms