RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZNF815PA8K554 130 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 PMS2P5A8MQ11 134 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 SCRT1Q9BWW7 348 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 A0A0U1RRA0 63 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 NMSQ5H8A3 153 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 CD177Q8N6Q3 437 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 IFI27L1Q96BM0 104 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 KIF26BQ2KJY2 2108 aa14.52□□□□□ -0.08
NPHP4-209ENST00000489180 ZFP36L1Q07352 338 aaKnown RBP14.52□□□□□ -0.09
NPHP4-209ENST00000489180 AGMATQ9BSE5 352 aa14.52□□□□□ -0.09
NPHP4-209ENST00000489180 TNFSF13O75888 250 aa14.52□□□□□ -0.09
NPHP4-209ENST00000489180 PAX2Q02962 417 aa14.52□□□□□ -0.09
NPHP4-209ENST00000489180 CD300EQ496F6 205 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-209ENST00000489180 TMEM167AQ8TBQ9 72 aa14.52□□□□□ -0.09
NPHP4-209ENST00000489180 NXT2Q9NPJ8 142 aaKnown RBP14.52□□□□□ -0.09
NPHP4-209ENST00000489180 TRAV21A0A0B4J279 112 aa14.51□□□□□ -0.09
NPHP4-209ENST00000489180 GTSCR1Q86UQ5 136 aa14.51□□□□□ -0.09
NPHP4-209ENST00000489180 ARHGEF17Q96PE2 2063 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-209ENST00000489180 PGPEP1Q9NXJ5 209 aa14.51□□□□□ -0.09
NPHP4-209ENST00000489180 CYSLTR1Q9Y271 337 aa14.51□□□□□ -0.09
NPHP4-209ENST00000489180 D6R8Y8 96 aa14.5□□□□□ -0.09
NPHP4-209ENST00000489180 SRSF7Q16629 238 aaKnown RBP eCLIP14.5□□□□□ -0.09
NPHP4-209ENST00000489180 ESPL1Q14674 2120 aa14.5□□□□□ -0.09
NPHP4-209ENST00000489180 ACTL10Q5JWF8 245 aa14.5□□□□□ -0.09
NPHP4-209ENST00000489180 TMEM42Q69YG0 159 aa14.5□□□□□ -0.09
NPHP4-209ENST00000489180 SDK2Q58EX2 2172 aa14.5□□□□□ -0.09
NPHP4-209ENST00000489180 PSG1P11464 419 aa14.5□□□□□ -0.09
NPHP4-209ENST00000489180 FAM166AQ6J272 317 aa14.5□□□□□ -0.09
NPHP4-209ENST00000489180 A0A1B0GW64 132 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 TMEM200BQ69YZ2 307 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 hDV102S1A0JD36 115 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 THBDP07204 575 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 CD28P10747 220 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 LCN12Q6JVE5 192 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 RNASE6Q93091 150 aaKnown RBP14.49□□□□□ -0.09
NPHP4-209ENST00000489180 LSM4Q9Y4Z0 139 aaKnown RBP14.49□□□□□ -0.09
NPHP4-209ENST00000489180 TRAV1-1A0A0B4J248 108 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 CFAP161Q6P656 301 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 WNK3Q9BYP7 1800 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 QRFPP83859 136 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 KLRD1Q13241 179 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 PSMG4Q5JS54 123 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 ATP5L2Q7Z4Y8 100 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 RPUSD1Q9UJJ7 312 aaKnown RBP14.49□□□□□ -0.09
NPHP4-209ENST00000489180 IGHV2-26A0A0B4J1V2 119 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 RBMY1BA6NDE4 496 aaKnown RBP14.49□□□□□ -0.09
NPHP4-209ENST00000489180 RBMY1EA6NEQ0 496 aaKnown RBP14.49□□□□□ -0.09
NPHP4-209ENST00000489180 LINC00473A8K010 186 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 RBMY1DP0C7P1 496 aaKnown RBP14.49□□□□□ -0.09
NPHP4-209ENST00000489180 RBMY1A1P0DJD3 496 aaKnown RBP14.49□□□□□ -0.09
NPHP4-209ENST00000489180 RBMY1CP0DJD4 496 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 ADCYAP1P18509 176 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 NPC2P61916 151 aa14.49□□□□□ -0.09
NPHP4-209ENST00000489180 FREM3P0C091 2139 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 SAMD5Q5TGI4 173 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 SRRM5B3KS81 715 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 SIGLEC15Q6ZMC9 328 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 STHQ8IWL8 128 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 SLC25A39Q9BZJ4 359 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-209ENST00000489180 MBNL3Q9NUK0 354 aaKnown RBP14.48□□□□□ -0.09
NPHP4-209ENST00000489180 ORMDL2Q53FV1 153 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 NTF4P34130 210 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 TP53BP1Q12888 1972 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-209ENST00000489180 PYY3Q5JQD4 70 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 ZNF479Q96JC4 524 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 PEMTQ9UBM1 199 aa14.48□□□□□ -0.09
NPHP4-209ENST00000489180 PPBPP02775 128 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 VDAC2P45880 294 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-209ENST00000489180 Q0VFX4 171 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 ZNF124Q15973 351 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 LYZL1Q6UWQ5 148 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 TMEM14EPQ6UXP3 125 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 NPFFR1Q9GZQ6 430 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 MPDZO75970 2070 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 A0A0G2JRQ6 117 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 PAX8Q06710 450 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 RNF182Q8N6D2 247 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 C11orf44Q8N8P7 122 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 OR2K2Q8NGT1 345 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 TCRAP04437 139 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 KLF17Q5JT82 389 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-209ENST00000489180 GBF1Q92538 1859 aa14.47□□□□□ -0.09
NPHP4-209ENST00000489180 IL18BPO95998 194 aa14.46□□□□□ -0.09
NPHP4-209ENST00000489180 IGFL4Q6B9Z1 124 aa14.46□□□□□ -0.09
NPHP4-209ENST00000489180 TMEM219Q86XT9 240 aa14.46□□□□□ -0.09
NPHP4-209ENST00000489180 HSD52Q0P140 79 aa14.46□□□□□ -0.09
NPHP4-209ENST00000489180 IGHV3-73A0A0B4J1V6 119 aa14.46□□□□□ -0.1
NPHP4-209ENST00000489180 NTN3O00634 580 aaPredicted RBP14.46□□□□□ -0.1
NPHP4-209ENST00000489180 MALP21145 153 aa14.46□□□□□ -0.1
NPHP4-209ENST00000489180 C1orf194Q5T5A4 169 aa14.46□□□□□ -0.1
NPHP4-209ENST00000489180 NUP35Q8NFH5 326 aa14.46□□□□□ -0.1
NPHP4-209ENST00000489180 MCRIP2Q9BUT9 160 aaKnown RBP14.46□□□□□ -0.1
NPHP4-209ENST00000489180 TRAV40A0A0B4J280 105 aa14.46□□□□□ -0.1
NPHP4-209ENST00000489180 LAGE3Q14657 143 aa14.46□□□□□ -0.1
NPHP4-209ENST00000489180 NDUFS6O75380 124 aaKnown RBP14.45□□□□□ -0.1
NPHP4-209ENST00000489180 ZNF138P52744 262 aa14.45□□□□□ -0.1
NPHP4-209ENST00000489180 ERVK11-1P61568 191 aa14.45□□□□□ -0.1
NPHP4-209ENST00000489180 Q8TAT8 98 aa14.45□□□□□ -0.1
NPHP4-209ENST00000489180 F2Z2F3 143 aa14.45□□□□□ -0.1
NPHP4-209ENST00000489180 IGHV1-8P0DP01 117 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms