RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PSG1P11464 419 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 ASAH1Q13510 395 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 ZBTB8BQ8NAP8 495 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-218ENST00000489037 STXBP6Q8NFX7 210 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 CITED4Q96RK1 184 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 RAB40CQ96S21 281 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 PBDC1Q9BVG4 233 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 MS4A6AQ9H2W1 248 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 C5orf51A6NDU8 294 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 SNRPGP15A8MWD9 76 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 FAM25EA8MYX2 175 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 UBE2CO00762 179 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 CFDP00746 253 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-218ENST00000489037 LILRB2Q8N423 598 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 C12orf45Q8N5I9 185 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-218ENST00000489037 RNF125Q96EQ8 232 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 SMIM8Q96KF7 97 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 TRGV9Q99603 122 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 SEC22CQ9BRL7 303 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 TBC1D24Q9ULP9 559 aa10.62□□□□□ -0.71
BRCA1-218ENST00000489037 L7N2F9 121 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 S100A7P31151 101 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 VAMP2P63027 116 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 AKR1C1Q04828 323 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 USF2Q15853 346 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-218ENST00000489037 OR8G2PQ6IF36 304 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 C16orf54Q6UWD8 224 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 STPG3Q8N7X2 389 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 PPP1R14BQ96C90 147 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 MAP6D1Q9H9H5 199 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 GPN1Q9HCN4 374 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-218ENST00000489037 U3KQE9 123 aa10.61□□□□□ -0.71
BRCA1-218ENST00000489037 KIR2DL5BA0A0G2JN68 375 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 KIR2DL5BA0A0G2JPC4 375 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 SMCO3A2RU48 225 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
BRCA1-218ENST00000489037 TAS2R30P59541 319 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 DEFA1P59665 94 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 DEFA3P59666 94 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 LYZP61626 148 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 ZNF90Q03938 601 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 OR2F1Q13607 317 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 KIR2DL5AQ8N109 375 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 THAP8Q8NA92 274 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 KIR2DL5BQ8NHK3 375 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 MUC7Q8TAX7 377 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 RETNQ9HD89 108 aa10.6□□□□□ -0.71
BRCA1-218ENST00000489037 IGKV1D-37A0A075B6S9 117 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 CCSO14618 274 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 TSC22D2O75157 780 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 IL5P05113 134 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 DEFB131AP59861 70 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 GSG1LQ6UXU4 331 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 BPIFCQ8NFQ6 507 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 OR10P1Q8NGE3 313 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 MGAT4CQ9UBM8 478 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 FBXL17Q9UF56 701 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 TENM3Q9P273 2699 aa10.59□□□□□ -0.71
BRCA1-218ENST00000489037 NBEAL2Q6ZNJ1 2754 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 PRSS46E5RG02 174 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 K7EQG2 157 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 BUB3O43684 328 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 METTL15P1P0C7V9 234 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 LYL1P12980 280 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 PVALBP20472 110 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-218ENST00000489037 SIGLEC15Q6ZMC9 328 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 Q6ZWC4 215 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 TMEM144Q7Z5S9 345 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 GLMPQ8WWB7 406 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 C2orf50Q96LR7 162 aa10.58□□□□□ -0.72
BRCA1-218ENST00000489037 RCL1Q9Y2P8 373 aaKnown RBP10.58□□□□□ -0.72
BRCA1-218ENST00000489037 LSM5Q9Y4Y9 91 aaKnown RBP10.58□□□□□ -0.72
BRCA1-218ENST00000489037 MBPP02686 304 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-218ENST00000489037 BCAP31P51572 246 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 SNRPD3P62318 126 aaKnown RBP10.57□□□□□ -0.72
BRCA1-218ENST00000489037 DLK1P80370 383 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 TMEM14EPQ6UXP3 125 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 STHQ8IWL8 128 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 IL17DQ8TAD2 202 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 NPVFQ9HCQ7 196 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 TP53TG1Q9Y2A0 90 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 AGRNO00468 2067 aa10.57□□□□□ -0.72
BRCA1-218ENST00000489037 IGKV1OR2-108A0A075B7D4 117 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 SPRY2O43597 315 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 PRAF2O60831 178 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 ZNF688P0C7X2 276 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 PAX9P55771 341 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 RRAS2P62070 204 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-218ENST00000489037 ZNF124Q15973 351 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 C1orf194Q5T5A4 169 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 LEMD1Q68G75 181 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 OR8I2Q8N0Y5 310 aa10.56□□□□□ -0.72
BRCA1-218ENST00000489037 TMEM147Q9BVK8 224 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms