RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 MYL5Q02045 173 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 C22orf39Q6P5X5 142 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 Q6ZRN7 208 aaPredicted RBP1.16□□□□□ -2.22
RFC4-213ENST00000489028 FP248Q71RG6 208 aaPredicted RBP1.16□□□□□ -2.22
RFC4-213ENST00000489028 SLC50A1Q9BRV3 221 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 PCBD2Q9H0N5 130 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 OR5AC2Q9NZP5 309 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 SS18L2Q9UHA2 77 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 HS3ST2Q9Y278 367 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 MED1Q15648 1581 aaPredicted RBP1.16□□□□□ -2.22
RFC4-213ENST00000489028 PTPRBP23467 1997 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 HEATR5AQ86XA9 2040 aa1.15□□□□□ -2.22
RFC4-213ENST00000489028 TRAV14DV4A0A0A6YYC5 116 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 TRBV6-5A0A0K0K1A5 114 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 PGRMC1O00264 195 aaKnown RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 MFSD11O43934 449 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 UBL3O95164 117 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 IFNA14P01570 189 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 ASAH2BP0C7U1 165 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 ZNF705BP0CI00 300 aaPredicted RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 MIFP14174 115 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 OGNP20774 298 aaKnown RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 NFYBP25208 207 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 RNASE4P34096 147 aaKnown RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 UBE2BP63146 152 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 ZNF846Q147U1 533 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 SNCBQ16143 134 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 BRMS1LQ5PSV4 323 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 IFT20Q8IY31 132 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 SLC30A7Q8NEW0 376 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 STAG3L4Q8TBR4 150 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 TEX47Q8TBZ9 253 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 ZNF625Q96I27 306 aaPredicted RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 TEX37Q96LM6 180 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 Q96M85 177 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 NAA38Q9BRA0 125 aaKnown RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 LINC00467Q9BRT7 94 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 PRADC1Q9BSG0 188 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 OR2J1Q9GZK6 312 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 LAMTOR3Q9UHA4 124 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 STRCP1A6NGW2 1772 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 CPAMD8Q8IZJ3 1885 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 FN1P02751 2386 aaKnown RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 KIF1BO60333 1816 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 UHRF1BP1Q6BDS2 1440 aa1.15□□□□□ -2.23
RFC4-213ENST00000489028 YTHDC2Q9H6S0 1430 aaKnown RBP1.15□□□□□ -2.23
RFC4-213ENST00000489028 MYH11P35749 1972 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 A0A1B0GV72 72 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 M0R378 163 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 NDUFB3O43676 98 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 OR2T1O43869 369 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 PIAS1O75925 651 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 PRB1P04280 392 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 MGST1P10620 155 aaKnown RBP1.14□□□□□ -2.23
RFC4-213ENST00000489028 B2MP61769 119 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 DYNLT1P63172 113 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 NUMA1Q14980 2115 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 ESRGQ1W209 222 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 CROCCP2Q86T23 111 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 EXOC3-AS1Q8N2X6 119 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 LINC00311Q8N616 119 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 C12orf29Q8N999 325 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 NUP35Q8NFH5 326 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 OR10J5Q8NHC4 309 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 ZNF563Q8TA94 476 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 PLEKHB2Q96CS7 222 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 C6orf62Q9GZU0 229 aaPredicted RBP1.14□□□□□ -2.23
RFC4-213ENST00000489028 TMEM126AQ9H061 195 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 BCL2L10Q9HD36 194 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 PCTPQ9UKL6 214 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 ZFHX2Q9C0A1 2572 aaPredicted RBP1.14□□□□□ -2.23
RFC4-213ENST00000489028 RGS12O14924 1447 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 SETD5Q9C0A6 1442 aa1.14□□□□□ -2.23
RFC4-213ENST00000489028 TRAV1-1A0A0B4J248 108 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 A8MWV9 139 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 TIMM17BO60830 172 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 CRHP06850 196 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 BRS3P32247 399 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 RHOGP84095 191 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 DR1Q01658 176 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 EIF5AL1Q6IS14 154 aaKnown RBP1.13□□□□□ -2.23
RFC4-213ENST00000489028 DCUN1D2Q6PH85 259 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 SMIM15Q7Z3B0 74 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 PDZD9Q8IXQ8 264 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 FAM24BQ8N5W8 94 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 NPCDR1Q9BY65 106 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 MRPL32Q9BYC8 188 aaKnown RBP1.13□□□□□ -2.23
RFC4-213ENST00000489028 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 C14orf132Q9NPU4 83 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 ZNF106Q9H2Y7 1883 aaKnown RBP1.13□□□□□ -2.23
RFC4-213ENST00000489028 SYNMO15061 1565 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 GLI3P10071 1580 aa1.13□□□□□ -2.23
RFC4-213ENST00000489028 PRRC2BQ5JSZ5 2229 aaKnown RBP1.12□□□□□ -2.23
RFC4-213ENST00000489028 TLCD2A6NGC4 264 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 TMEM256-PLSCR3K7ERE1 68 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 GPR31O00270 319 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 OR1I1O60431 355 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 GADD45GO95257 159 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 IFNA21P01568 189 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms