RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 WI2-2373I1.2A0A1W2PRP0 233 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 ANKRD34BA5PLL1 514 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 PPP5D1E7EU14 171 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 GGCTO75223 188 aaKnown RBP12.32□□□□□ -0.44
CLDN11-208ENST00000488989 YIF1AO95070 293 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
CLDN11-208ENST00000488989 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 RELQ04864 619 aaPredicted RBP12.32□□□□□ -0.44
CLDN11-208ENST00000488989 PXDC1Q5TGL8 231 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 OR51G1Q8NGK1 321 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 Q8WTZ3 238 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 OR5B12Q96R08 314 aa12.32□□□□□ -0.44
CLDN11-208ENST00000488989 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 FFAR4Q5NUL3 377 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 LURAP1LQ8IV03 231 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 C11orf44Q8N8P7 122 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 KLHL30-AS1Q8NEE0 82 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 C19orf24Q9BVV8 132 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 ZFAND3Q9H8U3 227 aa12.31□□□□□ -0.44
CLDN11-208ENST00000488989 IGHV4OR15-8A0A075B7B6 117 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 A0A087WW49 117 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 UMAD1C9J7I0 102 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 NDUFA4O00483 81 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 MBP02144 154 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 SULT1A2P50226 295 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 ACOT6Q3I5F7 207 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-208ENST00000488989 KHDC1LQ5JSQ8 128 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 ALKAL2Q6UX46 152 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 TOMM20LQ6UXN7 152 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 Q6ZRG5 221 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 NDUFA11Q86Y39 141 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 GPHB5Q86YW7 130 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 CITED1Q99966 193 aa12.3□□□□□ -0.44
CLDN11-208ENST00000488989 PUS1Q9Y606 427 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLDN11-208ENST00000488989 IFNA7P01567 189 aa12.29□□□□□ -0.44
CLDN11-208ENST00000488989 M6PRP20645 277 aa12.29□□□□□ -0.44
CLDN11-208ENST00000488989 RAB5CP51148 216 aa12.29□□□□□ -0.44
CLDN11-208ENST00000488989 ELLP55199 621 aaPredicted RBP12.29□□□□□ -0.44
CLDN11-208ENST00000488989 AKR1C8PQ5T2L2 129 aa12.29□□□□□ -0.44
CLDN11-208ENST00000488989 TMEM158Q8WZ71 300 aa12.29□□□□□ -0.44
CLDN11-208ENST00000488989 RNF125Q96EQ8 232 aa12.29□□□□□ -0.44
CLDN11-208ENST00000488989 VSIRQ9H7M9 311 aa12.29□□□□□ -0.44
CLDN11-208ENST00000488989 ELOA3CA0A087WX78 387 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-208ENST00000488989 NUDT19A8MXV4 375 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 IL4P05112 153 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 ZP3P21754 424 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 FHL3Q13643 280 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 TMEM41BQ5BJD5 291 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 HIST2H2BDQ6DRA6 164 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 PATE2Q6UY27 113 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 DPPA3Q6W0C5 159 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 C8orf86Q6ZUL3 223 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 ZNF767PQ75MW2 155 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 OR1L4Q8NGR5 311 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 TMEM190Q8WZ59 177 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 RPRMQ9NS64 109 aa12.28□□□□□ -0.44
CLDN11-208ENST00000488989 MRPL27Q9P0M9 148 aaKnown RBP12.28□□□□□ -0.44
CLDN11-208ENST00000488989 FBN1P35555 2871 aaKnown RBP12.27□□□□□ -0.45
CLDN11-208ENST00000488989 IGHV3-35A0A0C4DH35 117 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 SEC14L6B5MCN3 397 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 LINC01619G3V211 115 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 HYPMO75409 117 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 OR5G3P0C626 314 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 RAB2AP61019 212 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 LYZP61626 148 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 USF2Q15853 346 aaPredicted RBP12.27□□□□□ -0.45
CLDN11-208ENST00000488989 RPEL1Q2QD12 228 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 GCSAMLQ5JQS6 135 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 REC114Q7Z4M0 266 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 RPP25LQ8N5L8 163 aaKnown RBP12.27□□□□□ -0.45
CLDN11-208ENST00000488989 OR11H1Q8NG94 326 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 OR1N2Q8NGR9 330 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 RCC1LQ96I51 464 aaKnown RBP12.27□□□□□ -0.45
CLDN11-208ENST00000488989 PFDN5Q99471 154 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 DNAJC4Q9NNZ3 241 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 UBQLN2Q9UHD9 624 aa12.27□□□□□ -0.45
CLDN11-208ENST00000488989 LGALS9O00182 355 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 RGS13O14921 159 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 HOXD3P31249 432 aaPredicted RBP12.26□□□□□ -0.45
CLDN11-208ENST00000488989 DEFB136Q30KP8 78 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 FAM106AQ4KMX7 169 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 FAM74A1Q5RGS3 127 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 UNQ9165/PRO28630Q6UXU0 137 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 OR10G4Q8NGN3 311 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 OR10G9Q8NGN4 311 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 OR10G7Q8NGN6 311 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 OR1B1Q8NGR6 318 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 RNF141Q8WVD5 230 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 RAX2Q96IS3 184 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 RNF2Q99496 336 aa12.26□□□□□ -0.45
CLDN11-208ENST00000488989 K7EMT4 169 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 COX7A2P2O60397 106 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 ORM2P19652 201 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 KLF5Q13887 457 aaPredicted RBP12.25□□□□□ -0.45
CLDN11-208ENST00000488989 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 LRRC20Q8TCA0 184 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms