RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PSMG4Q5JS54 123 aa8.7□□□□□ -1.02
CCHCR1-215ENST00000488920 CCDC190Q86UF4 302 aa8.7□□□□□ -1.02
CCHCR1-215ENST00000488920 PIGBOS1A0A0B4J2F0 54 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 DUXBA0A1W2PPF3 345 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 ZFP92A6NM28 416 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 BUB3O43684 328 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 ATP5IP56385 69 aaPredicted RBP8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 ZNF90Q03938 601 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 PPP1R1AQ13522 171 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 RNF125Q96EQ8 232 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 SLC25A21Q9BQT8 299 aaPredicted RBP8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 PBDC1Q9BVG4 233 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 C11orf68Q9H3H3 251 aaKnown RBP8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 CLEC5AQ9NY25 188 aa8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 PAIP2BQ9ULR5 123 aaKnown RBP8.69□□□□□ -1.02
CCHCR1-215ENST00000488920 IGKV1D-37A0A075B6S9 117 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 FAM90A26D6RGX4 464 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 SFT2D2O95562 160 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 HOXB5P09067 269 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 SPP1P10451 314 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 C4BPBP20851 252 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 SNRPD3P62318 126 aaKnown RBP8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 OR2F1Q13607 317 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 SIGLEC15Q6ZMC9 328 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 LRTM2Q8N967 370 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 SLC35E1Q96K37 410 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 MFFQ9GZY8 342 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 MAGT1Q9H0U3 335 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 RBM38Q9H0Z9 239 aaKnown RBP8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
CCHCR1-215ENST00000488920 IGHV4-28A0A0C4DH34 117 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 RBMY1A1P0DJD3 496 aaKnown RBP8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 RBMY1CP0DJD4 496 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 SLC25A6P12236 298 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 RAB11AP62491 216 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 RBMY1FQ15415 496 aaKnown RBP8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 SPANXN2Q5MJ10 180 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 GSG1LQ6UXU4 331 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 CENPSQ8N2Z9 138 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 Q8NAQ8 132 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 TMED3Q9Y3Q3 217 aa8.67□□□□□ -1.02
CCHCR1-215ENST00000488920 LINC00854A0A1B0GVQ3 168 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 SNRPGP15A8MWD9 76 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 WRBO00258 174 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 MED6O75586 246 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 FABP1P07148 127 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 LYZP61626 148 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 BAK1Q16611 211 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 GGNBP1Q5YKI7 109 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 OR8G2PQ6IF36 304 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 CSNK1G2-AS1Q8NCQ2 148 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 DEDD2Q8WXF8 326 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 PFDN2Q9UHV9 154 aa8.66□□□□□ -1.02
CCHCR1-215ENST00000488920 IGKV1OR2-108A0A075B7D4 117 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 ZNF705EA8MWA4 302 aaPredicted RBP8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 H3BMM0 161 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 SYNGR2O43760 224 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 MIFP14174 115 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 NUP62P37198 522 aaPredicted RBP8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 INPP1P49441 399 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 DEFB1P60022 68 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 RPP30P78346 268 aaKnown RBP8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 RPP25LQ8N5L8 163 aaKnown RBP8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 PPP1R14BQ96C90 147 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 LINC00052Q96N35 136 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 CIB3Q96Q77 187 aaPredicted RBP8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 TRGV9Q99603 122 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 WDR12Q9GZL7 423 aaKnown RBP8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 SEPSECSQ9HD40 501 aaKnown RBP8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 XCL2Q9UBD3 114 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 TBC1D24Q9ULP9 559 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 FLVCR2Q9UPI3 526 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 X6R8D5 127 aa8.65□□□□□ -1.02
CCHCR1-215ENST00000488920 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 C9orf170A2RU37 121 aa8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 ZNF701M0R085 212 aaPredicted RBP8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 ADAP1O75689 374 aa8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 C1orf194Q5T5A4 169 aa8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 TRIQKQ629K1 86 aa8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 THAP8Q8NA92 274 aa8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 C2CD4CQ8TF44 421 aa8.64□□□□□ -1.03
CCHCR1-215ENST00000488920 AGRNO00468 2067 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 IGLL5B9A064 214 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 H3BP45 60 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 DEDDO75618 318 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 NDUFB6O95139 128 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 HLA-DMBP28068 263 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 ID1P41134 155 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 NKX2-1P43699 371 aaPredicted RBP8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 FXYD7P58549 80 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 UBE2MP61081 183 aaKnown RBP8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 NUTF2P61970 127 aaKnown RBP8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 GDF5OSQ5U4N7 250 aa8.63□□□□□ -1.03
CCHCR1-215ENST00000488920 LGALS9CQ6DKI2 356 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms