RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 CNBD2Q96M20 576 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 ABHD1Q96SE0 405 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 SLC35B3Q9H1N7 401 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 RPRMQ9NS64 109 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 MRPL36Q9P0J6 103 aaKnown RBP4.58□□□□□ -1.68
PTCH1-211ENST00000488809 KLK11Q9UBX7 282 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 CACFD1Q9UGQ2 172 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 VPS13BQ7Z7G8 4022 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 A0A0B4J293 547 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 LOC100506127A0A0U1RQW1 187 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 SMIM31A0A1B0GVY4 71 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 A0A1W2PPQ1 181 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 ISLRO14498 428 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 INSP01308 110 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 IGKV1-5P01602 117 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 FABP1P07148 127 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 DEFB130BP0DP73 79 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 DEFB130AP0DP74 79 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 TSPOP30536 169 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 PIGPP57054 158 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 SUPT4H1P63272 117 aaKnown RBP4.57□□□□□ -1.68
PTCH1-211ENST00000488809 ZNF79Q15937 498 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 MLANAQ16655 118 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 IZUMO4Q1ZYL8 232 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 BSXQ3C1V8 233 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 C2orf83Q53S99 150 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 C1orf194Q5T5A4 169 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 PRSS54Q6PEW0 395 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 SSX7Q7RTT5 188 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 SPARTQ8N0X7 666 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 C1orf158Q8N1D5 194 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 OR51G1Q8NGK1 321 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 OR52E5Q8NH55 327 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 PPP1R14BQ96C90 147 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 RNF125Q96EQ8 232 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 IGF2BP2-AS1Q96M15 143 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 PBDC1Q9BVG4 233 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 Q9H8V8 135 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 HEYLQ9NQ87 328 aaPredicted RBP4.57□□□□□ -1.68
PTCH1-211ENST00000488809 DOK5Q9P104 306 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 COPZ2Q9P299 210 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 LINC00588Q9Y4M8 146 aa4.57□□□□□ -1.68
PTCH1-211ENST00000488809 A0A0J9YX75 114 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 C3orf85A0A1B0GTC6 90 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 CEBPZOSA8MTT3 80 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 ADAP1O75689 374 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 DUSP14O95147 198 aaKnown RBP4.56□□□□□ -1.68
PTCH1-211ENST00000488809 CLEC2LP0C7M8 214 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 P0C879 139 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 PSG1P11464 419 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 S100A7P31151 101 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 FAM78BQ5VT40 261 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 CDPF1Q6NVV7 123 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 LYSMD2Q8IV50 215 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 OR8I2Q8N0Y5 310 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 SAMD12Q8N8I0 201 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 NPIPB3Q92617 1050 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 ACY3Q96HD9 319 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 C16orf92Q96LL3 132 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 TP53RKQ96S44 253 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 Q9H3A6 140 aa4.56□□□□□ -1.68
PTCH1-211ENST00000488809 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.56□□□□□ -1.68
PTCH1-211ENST00000488809 CBY3A6NI87 242 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 ZFP92A6NM28 416 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 GABARAPH6UMI1 98 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 GABARAPO95166 117 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 TNFAIP8O95379 198 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 ZNF182P17025 639 aaPredicted RBP4.55□□□□□ -1.68
PTCH1-211ENST00000488809 UCP1P25874 307 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 GALR1P47211 349 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 RNASE10Q5GAN6 216 aaKnown RBP4.55□□□□□ -1.68
PTCH1-211ENST00000488809 IZUMO2Q6UXV1 221 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 GPR141Q7Z602 305 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 TMEM256Q8N2U0 113 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 ARRDC1Q8N5I2 433 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 OR10J6PQ8NGY7 276 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 ZFAND1Q8TCF1 268 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 GPX8Q8TED1 209 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 RNF141Q8WVD5 230 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 ZNF503Q96F45 646 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 UPK3BQ9BT76 320 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 WDR12Q9GZL7 423 aaKnown RBP4.55□□□□□ -1.68
PTCH1-211ENST00000488809 PGPEP1Q9NXJ5 209 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 RAB26Q9ULW5 256 aa4.55□□□□□ -1.68
PTCH1-211ENST00000488809 A8MTW9 85 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 ZNF705GA8MUZ8 300 aaPredicted RBP4.54□□□□□ -1.68
PTCH1-211ENST00000488809 SNRPGP15A8MWD9 76 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 F6UB75 175 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 SOCS3O14543 225 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 CFDP00746 253 aaPredicted RBP4.54□□□□□ -1.68
PTCH1-211ENST00000488809 IFNA5P01569 189 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 TBPP20226 339 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 ATP5IP56385 69 aaPredicted RBP4.54□□□□□ -1.68
PTCH1-211ENST00000488809 DEFB1P60022 68 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 KRTAP10-2P60368 255 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 ERVFC1-1P60608 527 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 LYZP61626 148 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 KLF9Q13886 244 aaPredicted RBP4.54□□□□□ -1.68
PTCH1-211ENST00000488809 AARDQ4LEZ3 155 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 Q5VSD8 79 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms