RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 VWC2LB2RUY7 222 aa10.15□□□□□ -0.78
CLIC4-202ENST00000488683 KLF17Q5JT82 389 aaPredicted RBP10.15□□□□□ -0.78
CLIC4-202ENST00000488683 LDLRAD2Q5SZI1 272 aa10.15□□□□□ -0.78
CLIC4-202ENST00000488683 WNT10AQ9GZT5 417 aa10.15□□□□□ -0.78
CLIC4-202ENST00000488683 CDC42EP3Q9UKI2 254 aa10.15□□□□□ -0.78
CLIC4-202ENST00000488683 IGHV1-69-2A0A0G2JMI3 117 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.14□□□□□ -0.79
CLIC4-202ENST00000488683 ZNF137PP52743 207 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 CX3CL1P78423 397 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 PMCHL1Q16048 86 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 VSTM2AQ8TAG5 236 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 FXYD5Q96DB9 178 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 NOL4LQ96MY1 436 aaPredicted RBP10.14□□□□□ -0.79
CLIC4-202ENST00000488683 OSTCQ9NRP0 149 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 ZNF835Q9Y2P0 537 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 CELSR2Q9HCU4 2923 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 PGPA6NDG6 321 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 BMPR1BO00238 502 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 ZNF253O75346 499 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 TPTE2P1Q5T6R2 138 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 CYB5R2Q6BCY4 276 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 OR4A5Q8NH83 315 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 TP73-AS1Q9UF72 201 aa10.14□□□□□ -0.79
CLIC4-202ENST00000488683 TBL2Q9Y4P3 447 aaKnown RBP10.14□□□□□ -0.79
CLIC4-202ENST00000488683 IGLC7A0M8Q6 106 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 SIAH2O43255 324 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 LCN12Q6JVE5 192 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 FAM71F2Q6NXP2 309 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 BCL6BQ8N143 479 aaPredicted RBP10.13□□□□□ -0.79
CLIC4-202ENST00000488683 NUDT10Q8NFP7 164 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 NUDT11Q96G61 164 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 HILPDAQ9Y5L2 63 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 CRYBG3Q68DQ2 2970 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 SH2D7A6NKC9 451 aaPredicted RBP10.13□□□□□ -0.79
CLIC4-202ENST00000488683 SLC25A5P05141 298 aaKnown RBP10.13□□□□□ -0.79
CLIC4-202ENST00000488683 AMTP48728 403 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 COMPP49747 757 aaPredicted RBP10.13□□□□□ -0.79
CLIC4-202ENST00000488683 TPPP2P59282 170 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 TAS2R60P59551 318 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 SPACA3Q8IXA5 215 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 THAP8Q8NA92 274 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 GNB1LQ9BYB4 327 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 KAAG1Q9UBP8 84 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 PEX7O00628 323 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 KLRD1Q13241 179 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 EXOC3-AS1Q8N2X6 119 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 TMEM68Q96MH6 324 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 C17orf77Q96MU5 243 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 TMEM133Q9H2Q1 129 aa10.13□□□□□ -0.79
CLIC4-202ENST00000488683 UTP20O75691 2785 aaKnown RBP10.12□□□□□ -0.79
CLIC4-202ENST00000488683 IGHV2-26A0A0B4J1V2 119 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 A0A1W2PS18 150 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 ESDP10768 282 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 VMA21Q3ZAQ7 101 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 ASCL5Q7RTU5 278 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 SCNM1Q9BWG6 230 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 SMIM27A0A1W2PRY6 76 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 FOXA3P55318 350 aaPredicted RBP10.12□□□□□ -0.79
CLIC4-202ENST00000488683 LYZP61626 148 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 TBR1Q16650 682 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 NUP35Q8NFH5 326 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 ONECUT1Q9UBC0 465 aa10.12□□□□□ -0.79
CLIC4-202ENST00000488683 ITPR1Q14643 2758 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 IGHV3OR16-8A0A075B7F1 116 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 SUB1P53999 127 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLIC4-202ENST00000488683 PLGLAQ15195 96 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 NRN1Q9NPD7 142 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 INSIG2Q9Y5U4 225 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 IGHV3-23P01764 117 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 RBP4P02753 201 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 Q0VG73 95 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 C1orf194Q5T5A4 169 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 SIGLECL1Q8N7X8 197 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 OR2D3Q8NGH3 330 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 OR1L4Q8NGR5 311 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 RNF2Q99496 336 aa10.11□□□□□ -0.79
CLIC4-202ENST00000488683 TIMM8BQ9Y5J9 83 aaPredicted RBP10.11□□□□□ -0.79
CLIC4-202ENST00000488683 KIR2DL5BA0A0G2JN68 375 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 KIR2DL5BA0A0G2JPC4 375 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 HIGD1CA8MV81 97 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 IGLV1-47P01700 117 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 GPX1P07203 203 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 CRYGCP07315 174 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 MC5RP33032 325 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 RPL27AP46776 148 aaKnown RBP10.1□□□□□ -0.79
CLIC4-202ENST00000488683 BPIFB3P59826 476 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 ARF6P62330 175 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 KIR2DL5AQ8N109 375 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 NEU1Q99519 415 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
CLIC4-202ENST00000488683 TRBV9A0A0B4J1U6 114 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 IGHV1-3A0A0C4DH29 117 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 APCSP02743 223 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 CRYGBP07316 175 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 MYCNOSP40205 109 aa10.1□□□□□ -0.79
CLIC4-202ENST00000488683 NBL1P41271 181 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms