RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 CLINT1Q14677 625 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 TEPPQ6URK8 271 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 THAP8Q8NA92 274 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 OR5C1Q8NGR4 320 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
SKA1-204ENST00000488454 TRGV9Q99603 122 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 GINS3Q9BRX5 216 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 GPR61Q9BZJ8 451 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 HSPB11Q9Y547 144 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 PUS1Q9Y606 427 aaKnown RBP eCLIP7.87□□□□□ -1.15
SKA1-204ENST00000488454 A0A1B0GVG6 124 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 SMLR1H3BR10 107 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 K7EMT4 169 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 DFFBO76075 338 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 IFNA5P01569 189 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 PSG1P11464 419 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 AP2S1P53680 142 aaPredicted RBP7.86□□□□□ -1.15
SKA1-204ENST00000488454 ELLP55199 621 aaPredicted RBP7.86□□□□□ -1.15
SKA1-204ENST00000488454 SELENOTP62341 195 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 ZNF90Q03938 601 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 OR2F1Q13607 317 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 TOMM20LQ6UXN7 152 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 UNQ9165/PRO28630Q6UXU0 137 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 CYP2G1PQ6ZSU1 146 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 OR51G1Q8NGK1 321 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 SCGB1C1Q8TD33 95 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 NARS2Q96I59 477 aaKnown RBP7.86□□□□□ -1.15
SKA1-204ENST00000488454 AQP10Q96PS8 301 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 PFDN2Q9UHV9 154 aa7.86□□□□□ -1.15
SKA1-204ENST00000488454 IGKV1D-37A0A075B6S9 117 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 IGHV3OR16-8A0A075B7F1 116 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 UBE2L5PA0A1B0GUS4 154 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 ARPC5O15511 151 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 MPDU1O75352 247 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 SAP30O75446 220 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 IL4P05112 153 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 NPPCP23582 126 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 S100A7P31151 101 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 BMI1P35226 326 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 INSL3P51460 131 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 VWC2Q2TAL6 325 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 TM4SF20Q53R12 229 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 BTNL8Q6UX41 500 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 TCTE3Q8IZS6 198 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 ZNF709Q8N972 641 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 BPIFCQ8NFQ6 507 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 DYNLRB2Q8TF09 96 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 TMEM190Q8WZ59 177 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 MARC2Q969Z3 335 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 ST6GAL2Q96JF0 529 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 METTL26Q96S19 204 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 ATP5SQ99766 215 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 SMIM3Q9BZL3 60 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 MFFQ9GZY8 342 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 DAZ1Q9NQZ3 744 aaKnown RBP7.85□□□□□ -1.15
SKA1-204ENST00000488454 MRPL27Q9P0M9 148 aaKnown RBP7.85□□□□□ -1.15
SKA1-204ENST00000488454 TNFSF18Q9UNG2 199 aa7.85□□□□□ -1.15
SKA1-204ENST00000488454 IGKV1OR2-108A0A075B7D4 117 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 A0A1W2PS18 150 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 C2orf70A6NJV1 201 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 AGPAT2O15120 278 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 ZNF207O43670 478 aaKnown RBP7.84□□□□□ -1.15
SKA1-204ENST00000488454 CSN3P07498 182 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 FOLR2P14207 255 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 IGLL1P15814 213 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 FGF7P21781 194 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 CBLN1P23435 193 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 CAMLGP49069 296 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 LYZP61626 148 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 S100A7AQ86SG5 101 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 PBDC1Q9BVG4 233 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 SIGLEC8Q9NYZ4 499 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 ZMAT5Q9UDW3 170 aaKnown RBP7.84□□□□□ -1.15
SKA1-204ENST00000488454 RABAC1Q9UI14 185 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 WDR83OSQ9Y284 106 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 ANK2Q01484 3957 aa7.84□□□□□ -1.15
SKA1-204ENST00000488454 HMSDA8MTL9 139 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 A8MWP6 167 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 C17orf112F2Z3M2 114 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 G3V3Q6 166 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 ORM2P19652 201 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 ZNF266Q14584 549 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 Q6ZRG5 221 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 PPP1R14BQ96C90 147 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 RNF125Q96EQ8 232 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 TMEM231Q9H6L2 316 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 TECRQ9NZ01 308 aaKnown RBP7.83□□□□□ -1.16
SKA1-204ENST00000488454 FBXL17Q9UF56 701 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 LSM4Q9Y4Z0 139 aaKnown RBP7.83□□□□□ -1.16
SKA1-204ENST00000488454 WNK1Q9H4A3 2382 aa7.83□□□□□ -1.16
SKA1-204ENST00000488454 BORCS7-ASMTA0A0B4J1R7 106 aa7.82□□□□□ -1.16
SKA1-204ENST00000488454 A0A0D9SG52 128 aa7.82□□□□□ -1.16
SKA1-204ENST00000488454 IGHV7-4-1A0A0J9YVY3 117 aa7.82□□□□□ -1.16
SKA1-204ENST00000488454 WI2-2373I1.2A0A1W2PRP0 233 aa7.82□□□□□ -1.16
SKA1-204ENST00000488454 TMEM213A2RRL7 107 aa7.82□□□□□ -1.16
SKA1-204ENST00000488454 TAAR5O14804 337 aa7.82□□□□□ -1.16
SKA1-204ENST00000488454 HYPMO75409 117 aa7.82□□□□□ -1.16
SKA1-204ENST00000488454 HNRNPCP07910 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms