RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	CACFD1	Q9UGQ2	172 aa		10.85	□□□□□ -0.67
NELFA-215	ENST00000488452	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	ZNF705D	P0CH99	300 aa	Predicted RBP	10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	ZNF705B	P0CI00	300 aa	Predicted RBP	10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	EMP1	P54849	157 aa		10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	MEF2D	Q14814	521 aa		10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	TMEM268	Q5VZI3	342 aa		10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	OR51G1	Q8NGK1	321 aa		10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	PFDN2	Q9UHV9	154 aa		10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	RFNG	Q9Y644	331 aa		10.84	□□□□□ -0.67
NELFA-215	ENST00000488452	GABARAP	H6UMI1	98 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	GABARAP	O95166	117 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	IGKV3-20	P01619	116 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	NUP62	P37198	522 aa	Predicted RBP	10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	ID1	P41134	155 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	FXYD7	P58549	80 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	SSBP1	Q04837	148 aa	Known RBP	10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	SURF2	Q15527	256 aa	Predicted RBP	10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	GDF5OS	Q5U4N7	250 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	GPR107	Q5VW38	600 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	UBE2DNL	Q8IWF7	75 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	LINC00052	Q96N35	136 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	GPR132	Q9UNW8	380 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	TMEM56-RWDD3	S4R434	201 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	RYR1	P21817	5038 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	PKHD1	P08F94	4074 aa		10.83	□□□□□ -0.68
NELFA-215	ENST00000488452	DYNC1H1	Q14204	4646 aa	Known RBP	10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	IGHV3OR16-12	A0A075B7B8	117 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	TEX48	A0A1B0GUV7	120 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	CRYM-AS1	A6NIL9	109 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	DISC1	C4P0D8	188 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	SULT1A3	P0DMM9	295 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	SULT1A4	P0DMN0	295 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	KLF9	Q13886	244 aa	Predicted RBP	10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	NMS	Q5H8A3	153 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	FAAP20	Q6NZ36	180 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	FOXI2	Q6ZQN5	318 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	RNF125	Q96EQ8	232 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	CLUHP3	Q96NS8	147 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	PBDC1	Q9BVG4	233 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	SAV1	Q9H4B6	383 aa	Predicted RBP	10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	DKK2	Q9UBU2	259 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452		U3KQ87	197 aa		10.82	□□□□□ -0.68
NELFA-215	ENST00000488452	DEFB1	P60022	68 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	MRPS10	P82664	201 aa	Known RBP	10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	CTF1	Q16619	201 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	OR8G2P	Q6IF36	304 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452		Q6ZR54	194 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	OR4B1	Q8NGF8	309 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	NIPSNAP3B	Q9BS92	247 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	WDR12	Q9GZL7	423 aa	Known RBP	10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	KCNIP3	Q9Y2W7	256 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	DNAH11	Q96DT5	4516 aa		10.81	□□□□□ -0.68
NELFA-215	ENST00000488452	PKD1	P98161	4303 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	IGLV2-18	A0A075B6J9	118 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	PSMB3	P49720	205 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	OXA1L	Q15070	435 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	RNF212	Q495C1	297 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	FAM222A	Q5U5X8	452 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	SPATA31B1P	Q5VZV4	182 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	LGI3	Q8N145	548 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	ZNF709	Q8N972	641 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	IL22RA2	Q969J5	263 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	NAA50	Q9GZZ1	169 aa	Known RBP	10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	PLA2G2E	Q9NZK7	142 aa		10.8	□□□□□ -0.68
NELFA-215	ENST00000488452	ZFP92	A6NM28	416 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	AKAIN1	P0CW23	69 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	GPX4	P36969	197 aa	Predicted RBP	10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	CCR6	P51684	374 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	ATP5I	P56385	69 aa	Predicted RBP	10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	PSG9	Q00887	426 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	ZNF90	Q03938	601 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	SOHLH1	Q5JUK2	328 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	C1orf194	Q5T5A4	169 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	COQ8A	Q8NI60	647 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	DTD1	Q8TEA8	209 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	MIXL1	Q9H2W2	232 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	RBKS	Q9H477	322 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	HSPB7	Q9UBY9	170 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	GOLT1B	Q9Y3E0	138 aa		10.79	□□□□□ -0.68
NELFA-215	ENST00000488452	SOCS3	O14543	225 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	SUPT4H1	P63272	117 aa	Known RBP	10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	GAMT	Q14353	236 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	ZNF79	Q15937	498 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	EBLN2	Q6P2I7	272 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	C1orf158	Q8N1D5	194 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	SLC35E1	Q96K37	410 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	PRRT1	Q99946	306 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	C7orf50	Q9BRJ6	194 aa	Known RBP	10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	SLC35B3	Q9H1N7	401 aa		10.78	□□□□□ -0.68
NELFA-215	ENST00000488452	IGKV1D-37	A0A075B6S9	117 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	LOC102723971	A0A1B0GUV8	181 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	SNRPGP15	A8MWD9	76 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	RGS5	O15539	181 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	HBE1	P02100	147 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	FABP1	P07148	127 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	HTN3	P15516	51 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	PAX9	P55771	341 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	SMCO1	Q147U7	214 aa		10.77	□□□□□ -0.69
NELFA-215	ENST00000488452	FAM78B	Q5VT40	261 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms