RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 FAM167A-AS1Q96KT0 104 aa11.51□□□□□ -0.57
RER1-207ENST00000488353 SOX21Q9Y651 276 aaPredicted RBP11.51□□□□□ -0.57
RER1-207ENST00000488353 SMG1Q96Q15 3661 aaKnown RBP11.5□□□□□ -0.57
RER1-207ENST00000488353 PPIAL4DF5H284 164 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
RER1-207ENST00000488353 TMEM97Q5BJF2 176 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 MOB3BQ86TA1 216 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 MOGAT3Q86VF5 341 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 DDB2Q92466 427 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 SLC25A2Q9BXI2 301 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 FNDC4Q9H6D8 234 aaPredicted RBP11.5□□□□□ -0.57
RER1-207ENST00000488353 APOA2P02652 100 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 LOXL3P58215 753 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 IGFL3Q6UXB1 125 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 Q6ZS92 163 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 C2orf91Q6ZV80 131 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 BHLHA15Q7RTS1 189 aaPredicted RBP11.5□□□□□ -0.57
RER1-207ENST00000488353 LHFPL4Q7Z7J7 247 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 RBMXL3Q8N7X1 1067 aaKnown RBP11.5□□□□□ -0.57
RER1-207ENST00000488353 C1orf162Q8NEQ5 155 aaPredicted RBP11.5□□□□□ -0.57
RER1-207ENST00000488353 IFI27L2Q9H2X8 130 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 FAM215AQ9Y5M1 114 aa11.5□□□□□ -0.57
RER1-207ENST00000488353 C9orf118A6NHY6 69 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 SRRM5B3KS81 715 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 MGST3O14880 152 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 MBNL2Q5VZF2 373 aaKnown RBP11.49□□□□□ -0.57
RER1-207ENST00000488353 ASCL5Q7RTU5 278 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 ZC2HC1AQ96GY0 325 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 NDFIP1Q9BT67 221 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 C7orf69Q9H7B7 122 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 OR51B2Q9Y5P1 312 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 PLCE1Q9P212 2302 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
RER1-207ENST00000488353 MBD3L3A6NE82 208 aaPredicted RBP11.49□□□□□ -0.57
RER1-207ENST00000488353 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
RER1-207ENST00000488353 H3BRM9 83 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 SPRY3O43610 288 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 IGLV1-44P01699 117 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 ATP5IP56385 69 aaPredicted RBP11.49□□□□□ -0.57
RER1-207ENST00000488353 LINC01545Q5VT33 79 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 C5orf17Q8NAS9 161 aa11.49□□□□□ -0.57
RER1-207ENST00000488353 MBD3L2Q8NHZ7 208 aaPredicted RBP11.49□□□□□ -0.57
RER1-207ENST00000488353 ARFGEF3Q5TH69 2177 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 DSCAML1Q8TD84 2053 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 A6NDN8 102 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 A8MWL6 223 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 DUX4L9Q6RFH8 374 aaPredicted RBP11.48□□□□□ -0.57
RER1-207ENST00000488353 CALYQ9NYX4 217 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 H0Y8G0 127 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 M0R1B8 84 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 C1orf185Q5T7R7 199 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
RER1-207ENST00000488353 NEGR1Q7Z3B1 354 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 WFDC8Q8IUA0 241 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 OR9G1Q8NH87 305 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 MCRIP2Q9BUT9 160 aaKnown RBP11.48□□□□□ -0.57
RER1-207ENST00000488353 PRNDQ9UKY0 176 aa11.48□□□□□ -0.57
RER1-207ENST00000488353 PSMB11A5LHX3 300 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 K7EP34 96 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 CD24P25063 80 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 RBPJQ06330 500 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 CT45A1Q5HYN5 189 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 PRR31Q5SQ13 230 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 DEFB108BQ8NET1 73 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 CT45A3Q8NHU0 189 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 PPP1R35Q8TAP8 253 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
RER1-207ENST00000488353 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 PRCDQ00LT1 54 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 C2orf83Q53S99 150 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 CT83Q5H943 113 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 SLC25A15Q9Y619 301 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 TANC2Q9HCD6 1990 aa11.47□□□□□ -0.57
RER1-207ENST00000488353 NDUFS8O00217 210 aa11.46□□□□□ -0.57
RER1-207ENST00000488353 PYYP10082 97 aa11.46□□□□□ -0.57
RER1-207ENST00000488353 MZT1Q08AG7 82 aa11.46□□□□□ -0.57
RER1-207ENST00000488353 SVIPQ8NHG7 77 aa11.46□□□□□ -0.57
RER1-207ENST00000488353 ITLN1Q8WWA0 313 aa11.46□□□□□ -0.57
RER1-207ENST00000488353 TMEM186Q96B77 213 aa11.46□□□□□ -0.57
RER1-207ENST00000488353 F2RL2O00254 374 aa11.46□□□□□ -0.58
RER1-207ENST00000488353 SAA2P0DJI9 122 aaPredicted RBP11.46□□□□□ -0.58
RER1-207ENST00000488353 MLANAQ16655 118 aa11.46□□□□□ -0.58
RER1-207ENST00000488353 OR2K2Q8NGT1 345 aa11.46□□□□□ -0.58
RER1-207ENST00000488353 GPR82Q96P67 336 aa11.46□□□□□ -0.58
RER1-207ENST00000488353 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.58
RER1-207ENST00000488353 RAI1Q7Z5J4 1906 aaPredicted RBP11.45□□□□□ -0.58
RER1-207ENST00000488353 H3BUT2 72 aa11.45□□□□□ -0.58
RER1-207ENST00000488353 CHEK1O14757 476 aa11.45□□□□□ -0.58
RER1-207ENST00000488353 SNAI2O43623 268 aa11.45□□□□□ -0.58
RER1-207ENST00000488353 CD69Q07108 199 aa11.45□□□□□ -0.58
RER1-207ENST00000488353 POU2AF1Q16633 256 aa11.45□□□□□ -0.58
RER1-207ENST00000488353 C17orf58Q2M2W7 97 aa11.45□□□□□ -0.58
RER1-207ENST00000488353 CR1LQ2VPA4 569 aa11.45□□□□□ -0.58
RER1-207ENST00000488353 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms