RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 A0A0J9YX75 114 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 NOTOA8MTQ0 251 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 RGS10O43665 173 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 INSP01308 110 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 IGLC1P0CG04 106 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 RD3LP0DJH9 198 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 AZU1P20160 251 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 B2MP61769 119 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 IZUMO4Q1ZYL8 232 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
COL17A1-207ENST00000488320 TBC1D26Q86UD7 250 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 RXFP4Q8TDU9 374 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 LINC01587Q99440 93 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 WDR12Q9GZL7 423 aaKnown RBP6.38□□□□□ -1.39
COL17A1-207ENST00000488320 RPRMQ9NS64 109 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 FAM212BQ9NTI7 297 aaPredicted RBP6.38□□□□□ -1.39
COL17A1-207ENST00000488320 DOK5Q9P104 306 aa6.38□□□□□ -1.39
COL17A1-207ENST00000488320 TRDV1A0A1B0GX56 115 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 INS-IGF2F8WCM5 200 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 IGKV1-39P01597 117 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
COL17A1-207ENST00000488320 IGKV1D-39P04432 117 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 DNAH10OSP0CZ25 163 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 M6PRP20645 277 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 NUP62P37198 522 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-207ENST00000488320 HSPA13P48723 471 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 RND2P52198 227 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 PAX9P55771 341 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 TAS2R20P59543 309 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 LPCAT3Q6P1A2 487 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 OR51G1Q8NGK1 321 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 OR5H2Q8NGV7 314 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 C16orf92Q96LL3 132 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 PBDC1Q9BVG4 233 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 AUNIPQ9H7T9 357 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 DIABLOQ9NR28 239 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 TIMM8BQ9Y5J9 83 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-207ENST00000488320 TNFRSF18Q9Y5U5 241 aa6.37□□□□□ -1.39
COL17A1-207ENST00000488320 A0A087WTM6 91 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 SIVA1O15304 175 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 TOMM40O96008 361 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 SLC25A4P12235 298 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 PSMB9P28065 219 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 TSPOP30536 169 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 AKR1C2P52895 323 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 SPINK13Q1W4C9 94 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 IDNKQ5T6J7 187 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 SFXN4Q6P4A7 337 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 PRSS54Q6PEW0 395 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 GPR141Q7Z602 305 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 NFE4Q86UQ8 179 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 OR10J6PQ8NGY7 276 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 DEFB104AQ8WTQ1 72 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 PPP1R14BQ96C90 147 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 FXYD6Q9H0Q3 95 aa6.36□□□□□ -1.39
COL17A1-207ENST00000488320 NOP10Q9NPE3 64 aaKnown RBP6.36□□□□□ -1.39
COL17A1-207ENST00000488320 A0A0B4J293 547 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 M0R2Z0 102 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 ISLRO14498 428 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 ADAP1O75689 374 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 DUSP14O95147 198 aaKnown RBP6.35□□□□□ -1.39
COL17A1-207ENST00000488320 PSG1P11464 419 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 TSPAN5P62079 268 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 ETFRF1Q6IPR1 90 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 NPIPB3Q92617 1050 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 GPR146Q96CH1 333 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 ACY3Q96HD9 319 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 DUSP21Q9H596 190 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 PPP1R14DQ9NXH3 145 aa6.35□□□□□ -1.39
COL17A1-207ENST00000488320 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 TRAV12-2A0A075B6T6 113 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 A0A0A6YYH2 397 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 PLAC8L1A1L4L8 177 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 A6NJ64 397 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 ZNF701M0R085 212 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-207ENST00000488320 SOCS3O14543 225 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 ATG12O94817 140 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 ZNF182P17025 639 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-207ENST00000488320 HTR2BP41595 481 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 TAS2R46P59540 309 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 TBCEQ15813 527 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-207ENST00000488320 SAMD13Q5VXD3 122 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 AMTNQ6UX39 209 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 PRSS48Q7RTY5 328 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 TMEM144Q7Z5S9 345 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 OR8I2Q8N0Y5 310 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 OR11H7Q8NGC8 314 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 OR5H6Q8NGV6 325 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 RNASE11Q8TAA1 199 aaKnown RBP6.34□□□□□ -1.39
COL17A1-207ENST00000488320 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 C16orf74Q96GX8 76 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 C20orf173Q96LM9 149 aa6.34□□□□□ -1.39
COL17A1-207ENST00000488320 HEYLQ9NQ87 328 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-207ENST00000488320 TRAV9-2A0A087WT02 112 aa6.33□□□□□ -1.4
COL17A1-207ENST00000488320 IGLV5-52A0A0A0MRZ9 124 aa6.33□□□□□ -1.4
COL17A1-207ENST00000488320 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-207ENST00000488320 IGKV1-5P01602 117 aa6.33□□□□□ -1.4
COL17A1-207ENST00000488320 UCP1P25874 307 aa6.33□□□□□ -1.4
COL17A1-207ENST00000488320 CNN1P51911 297 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms