RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 SH3BGRL3Q9H299 93 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 GNB4Q9HAV0 340 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 PEF1Q9UBV8 284 aaKnown RBP8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 TSSC4Q9Y5U2 329 aaPredicted RBP8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 PXMP4Q9Y6I8 212 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 GGCTO75223 188 aaKnown RBP8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 LINC00869P0C866 280 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 KIAA0141Q14154 515 aaPredicted RBP8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ACOT6Q3I5F7 207 aaPredicted RBP8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 TIGITQ495A1 244 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 FFAR4Q5NUL3 377 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ALKAL2Q6UX46 152 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 DPPA3Q6W0C5 159 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZNF600Q6ZNG1 722 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZNF767PQ75MW2 155 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 PFDN5Q99471 154 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 MDFIQ99750 246 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 SLC39A9Q9NUM3 307 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 UBQLN2Q9UHD9 624 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ELOA3CA0A087WX78 387 aaPredicted RBP8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 OR2C1O95371 312 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 PSG1P11464 419 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 SRSF2Q01130 221 aaKnown RBP8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZNF90Q03938 601 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ATRQ13535 2644 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 MIC13Q5XKP0 118 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZNF680Q8NEM1 530 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 OR1L4Q8NGR5 311 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 RNF141Q8WVD5 230 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 RNF24Q9Y225 148 aa8.17□□□□□ -1.1
HLA-DMB-261ENST00000487996 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 M6PRP20645 277 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZP3P21754 424 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 ADMP35318 185 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 ELLP55199 621 aaPredicted RBP8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 PLP1P60201 277 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 TMEM41BQ5BJD5 291 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 TCTEX1D4Q5JR98 221 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 TMEM182Q6ZP80 229 aaPredicted RBP8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 GATAD1Q8WUU5 269 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 RNF2Q99496 336 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 CHRDL1Q9BU40 450 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 PRELID1Q9Y255 219 aa8.16□□□□□ -1.1
HLA-DMB-261ENST00000487996 ANKRD34BA5PLL1 514 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 BMPR1BO00238 502 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 NDUFA4O00483 81 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 HSPB1P04792 205 aaKnown RBP8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 CD28P10747 220 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 SULT1A2P50226 295 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 RAB14P61106 215 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 RPEL1Q2QD12 228 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 FAM106AQ4KMX7 169 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 RNF125Q96EQ8 232 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 OR5B12Q96R08 314 aa8.15□□□□□ -1.1
HLA-DMB-261ENST00000487996 A0A1W2PPV4 95 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 PPP5D1E7EU14 171 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 I3L521 148 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 HYPMO75409 117 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 YIF1AO95070 293 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 IL4P05112 153 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 LYZP61626 148 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 AWAT1Q58HT5 328 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR10G4Q8NGN3 311 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR10G9Q8NGN4 311 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR10G7Q8NGN6 311 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 TMEM158Q8WZ71 300 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 DPF1Q92782 380 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 CITED2Q99967 270 aaPredicted RBP8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 DNAJC4Q9NNZ3 241 aa8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 PUS1Q9Y606 427 aaKnown RBP eCLIP8.15□□□□□ -1.11
HLA-DMB-261ENST00000487996 WI2-2373I1.2A0A1W2PRP0 233 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 TEX46H3BTG2 121 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 TRBV12-3P01733 135 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR5G3P0C626 314 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 ORM2P19652 201 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 GATA2P23769 480 aaPredicted RBP8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 RHOBP62745 196 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 BLOC1S1P78537 153 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 C10orf113Q5VZT2 155 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 NDUFA11Q86Y39 141 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 GPHB5Q86YW7 130 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 NARS2Q96I59 477 aaKnown RBP8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 PBDC1Q9BVG4 233 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 MRPL32Q9BYC8 188 aaKnown RBP8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 ACTR3CQ9C0K3 210 aaPredicted RBP8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 HIGD1AQ9Y241 93 aa8.14□□□□□ -1.11
HLA-DMB-261ENST00000487996 ZNF705EA8MWA4 302 aaPredicted RBP8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 LINC01619G3V211 115 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 RGS13O14921 159 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 TAS2R45P59539 299 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 RAB2AP61019 212 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 CTAG1AP78358 180 aa8.13□□□□□ -1.11
HLA-DMB-261ENST00000487996 IFITM2Q01629 132 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms