RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GEMIN2O14893 280 aaKnown RBP2.96□□□□□ -1.94
BRCA1-217ENST00000487825 APOA2P02652 100 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 MAS1LP35410 378 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 CDC34P49427 236 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-217ENST00000487825 HNRNPA3P51991 378 aaKnown RBP2.96□□□□□ -1.94
BRCA1-217ENST00000487825 PLP1P60201 277 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 UBE2G2P60604 165 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 RAB14P61106 215 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 CLINT1Q14677 625 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 PRSS8Q16651 343 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 C2orf83Q53S99 150 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 C10orf55Q5SWW7 151 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 KCNIP4Q6PIL6 250 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 PLET1Q6UQ28 207 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 HACD2Q6Y1H2 254 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 AKAP14Q86UN6 197 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 FAM24BQ8N5W8 94 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 OR4D5Q8NGN0 318 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 OR52N1Q8NH53 320 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF502Q8TBZ5 544 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 TEX47Q8TBZ9 253 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 ACOT12Q8WYK0 555 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 FGGYQ96C11 551 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 PELI1Q96FA3 418 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 CXorf58Q96LI9 332 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 KCTD14Q9BQ13 255 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-217ENST00000487825 AGMATQ9BSE5 352 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 TM2D1Q9BX74 207 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 CMTM6Q9NX76 183 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 SMPXQ9UHP9 88 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 AP3M1Q9Y2T2 418 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 RFNGQ9Y644 331 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 IGLV11-55A0A075B6I3 123 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 IGHV7-4-1A0A0J9YVY3 117 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 BBIP1A8MTZ0 92 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 GABRPO00591 440 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 RGS16O15492 202 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF207O43670 478 aaKnown RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 CA11O75493 328 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 GPX5O75715 221 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 SC5DO75845 299 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 ISG15P05161 165 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 HSMCR30P0CW71 290 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 MGMTP16455 207 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 FGF9P31371 208 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 ID1P41134 155 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 UBE2KP61086 200 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 DAD1P61803 113 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 PAFAH1B2P68402 229 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 RSU1Q15404 277 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 SPHARQ15513 63 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 HMGN3Q15651 99 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 TNFAIP8L3Q5GJ75 292 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 SSX6Q7RTT6 188 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 SCXQ7RTU7 201 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 ARPINQ7Z6K5 226 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF680Q8NEM1 530 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 OR6M1Q8NGM8 313 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 GPR148Q8TDV2 347 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 TNFAIP8L1Q8WVP5 186 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 TMEM37Q8WXS4 190 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 GALMQ96C23 342 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 CPNE2Q96FN4 548 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 TMEM109Q9BVC6 243 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 FUNDC2Q9BWH2 189 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 RHPN1-AS1Q9BWJ2 59 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 PARD6GQ9BYG4 376 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 MS4A6AQ9H2W1 248 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF430Q9H8G1 570 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 IL36GQ9NZH8 169 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 KCNIP1Q9NZI2 227 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 CLEC2DQ9UHP7 191 aa2.95□□□□□ -1.94
BRCA1-217ENST00000487825 MRPS16Q9Y3D3 137 aaKnown RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 SAMHD1Q9Y3Z3 626 aaKnown RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 YTHDF2Q9Y5A9 579 aaKnown RBP2.95□□□□□ -1.94
BRCA1-217ENST00000487825 IGHV3OR16-8A0A075B7F1 116 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 KNCNA6PVL3 124 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 MCRIP1C9JLW8 97 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 ZNF670-ZNF695F2Z2N8 137 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 NME4O00746 187 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 DENRO43583 198 aaKnown RBP2.94□□□□□ -1.94
BRCA1-217ENST00000487825 CREBL2O60519 120 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-217ENST00000487825 DHFRP00374 187 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 CD5P06127 495 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 HIST1H1BP16401 226 aaKnown RBP2.94□□□□□ -1.94
BRCA1-217ENST00000487825 CEBPGP53567 150 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 VMA21Q3ZAQ7 101 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 TMEM244Q5VVB8 128 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 UBE2UQ5VVX9 321 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 NXNL2Q5VZ03 156 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 CGB2Q6NT52 195 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 IDO2Q6ZQW0 420 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 TCF24Q7RTU0 167 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 SLC35F2Q8IXU6 374 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 OR51A4Q8NGJ6 313 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 MRPL30Q8TCC3 161 aaKnown RBP2.94□□□□□ -1.94
BRCA1-217ENST00000487825 GID8Q9NWU2 228 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 CLN6Q9NWW5 311 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 XCL2Q9UBD3 114 aa2.94□□□□□ -1.94
BRCA1-217ENST00000487825 IGHV3-49A0A0A0MS15 119 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms