RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 GZMBP10144 247 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 ESDP10768 282 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 CD79AP11912 226 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 CD99P14209 185 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 ATF1P18846 271 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 CXCL3P19876 107 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 CD34P28906 385 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TSPOP30536 169 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 GNG4P50150 75 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 DAPP51397 102 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TCL1AP56279 114 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TAS2R30P59541 319 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TBPL1P62380 186 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 HBG1P69891 147 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 HBG2P69892 147 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 CD164Q04900 197 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 PRDX4Q13162 271 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 ADIRFQ15847 76 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 PMCHL1Q16048 86 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 LTC4SQ16873 150 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TMEM249Q2WGJ8 235 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 SLC36A2Q495M3 483 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 ACSM3Q53FZ2 586 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 FAM162BQ5T6X4 162 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 HENMT1Q5T8I9 393 aaKnown RBP1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 FAM78BQ5VT40 261 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 AMMECR1LQ6DCA0 310 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 LYG2Q86SG7 212 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 ZNF567Q8N184 647 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 C3orf22Q8N5N4 141 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 ZNF439Q8NDP4 499 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 OR4S1Q8NGB4 309 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 OR5A1Q8NGJ0 315 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 OR4P4Q8NGL7 312 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 OR5AK2Q8NH90 309 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 GPR119Q8TDV5 335 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 OR5P2Q8WZ92 322 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 MS4A6EQ96DS6 147 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 SLAMF6Q96DU3 332 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TMEM56Q96MV1 263 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 IMMP2LQ96T52 175 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 LINC01587Q99440 93 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 GPER1Q99527 375 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 GPR22Q99680 433 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BLQ99880 126 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 FAAP24Q9BTP7 215 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 C1QTNF6Q9BXI9 259 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 DPY30Q9C005 99 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 POPDC3Q9HBV1 291 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 CBLN4Q9NTU7 201 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 PLEKHJ1Q9NW61 149 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 FAM206AQ9NX38 181 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 CACFD1Q9UGQ2 172 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TNFSF18Q9UNG2 199 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 MRPS16Q9Y3D3 137 aaKnown RBP1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 TMEM56-RWDD3S4R434 201 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 DDX60LQ5H9U9 1706 aaKnown RBP1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 ARAP2Q8WZ64 1704 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 SHANK3Q9BYB0 1731 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 SHANK1Q9Y566 2161 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 SCN7AQ01118 1682 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 GBF1Q92538 1859 aa1.73□□□□□ -2.13
SNRNP27-204ENST00000487029 SLIT2O94813 1529 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 A0A1B0GW64 132 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 OR6C6A6NF89 314 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 H0Y980 276 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 M0R2Z0 102 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CRXO43186 299 aaPredicted RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BKO60814 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 PDCD6O75340 191 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 S1PR2O95136 353 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HAND1O96004 215 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SOD1P00441 154 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CA2P00918 260 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 IGHV3-53P01767 116 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 APOA2P02652 100 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 C1QCP02747 245 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HLA-DQB2P05538 268 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BJP06899 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CD14P08571 375 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 LINC00032P0C843 101 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TRGC1P0CF51 173 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 OR13C7P0DN81 318 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CTSEP14091 401 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 AKR1C4P17516 323 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 RPS4Y1P22090 263 aaKnown RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BOP23527 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CDK2P24941 298 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CNTFRP26992 372 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 ATP6V0CP27449 155 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 ADORA1P30542 326 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 S100A3P33764 101 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BBP33778 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 KDELR2P33947 212 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 GABRA3P34903 492 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CRYBA4P53673 196 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BDP58876 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TAS2R41P59536 307 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TAS2R20P59543 309 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 ERVS71-1P61550 626 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms