RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NOL3O60936 208 aaKnown RBP17.8■□□□□ 0.44
LIME1-206ENST00000487026 KLF9Q13886 244 aaPredicted RBP17.8■□□□□ 0.44
LIME1-206ENST00000487026 TMEM41BQ5BJD5 291 aa17.8■□□□□ 0.44
LIME1-206ENST00000487026 SIGLEC15Q6ZMC9 328 aa17.8■□□□□ 0.44
LIME1-206ENST00000487026 OR1S1Q8NH92 325 aa17.8■□□□□ 0.44
LIME1-206ENST00000487026 X6R8D5 127 aa17.8■□□□□ 0.44
LIME1-206ENST00000487026 VPS13DQ5THJ4 4388 aa17.79■□□□□ 0.44
LIME1-206ENST00000487026 ANXA3P12429 323 aa17.79■□□□□ 0.44
LIME1-206ENST00000487026 CSNK1G2-AS1Q8NCQ2 148 aa17.79■□□□□ 0.44
LIME1-206ENST00000487026 PBDC1Q9BVG4 233 aa17.79■□□□□ 0.44
LIME1-206ENST00000487026 ZNF705EA8MWA4 302 aaPredicted RBP17.78■□□□□ 0.44
LIME1-206ENST00000487026 MIFP14174 115 aa17.78■□□□□ 0.44
LIME1-206ENST00000487026 ZNF90Q03938 601 aa17.78■□□□□ 0.44
LIME1-206ENST00000487026 GAMTQ14353 236 aa17.78■□□□□ 0.44
LIME1-206ENST00000487026 TMED4Q7Z7H5 227 aa17.78■□□□□ 0.44
LIME1-206ENST00000487026 NRN1Q9NPD7 142 aa17.78■□□□□ 0.44
LIME1-206ENST00000487026 ELOA3CA0A087WX78 387 aaPredicted RBP17.77■□□□□ 0.44
LIME1-206ENST00000487026 IGLL5B9A064 214 aa17.77■□□□□ 0.44
LIME1-206ENST00000487026 SNRPD3P62318 126 aaKnown RBP17.77■□□□□ 0.44
LIME1-206ENST00000487026 SRPXP78539 464 aa17.77■□□□□ 0.44
LIME1-206ENST00000487026 PYDC2Q56P42 97 aa17.77■□□□□ 0.44
LIME1-206ENST00000487026 RNF125Q96EQ8 232 aa17.77■□□□□ 0.44
LIME1-206ENST00000487026 TBC1D24Q9ULP9 559 aa17.77■□□□□ 0.44
LIME1-206ENST00000487026 IGKV1D-37A0A075B6S9 117 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 ZFP92A6NM28 416 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 HLA-DMBP28068 263 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 PRR20EP86478 221 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 PRR20CP86479 221 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 PRR20DP86480 221 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 PRR20BP86481 221 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 PRR20AP86496 221 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 GSG1LQ6UXU4 331 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 HRH4Q9H3N8 390 aa17.76■□□□□ 0.43
LIME1-206ENST00000487026 IAPPP10997 89 aa17.75■□□□□ 0.43
LIME1-206ENST00000487026 GPX4P36969 197 aaPredicted RBP17.75■□□□□ 0.43
LIME1-206ENST00000487026 DEFB1P60022 68 aa17.75■□□□□ 0.43
LIME1-206ENST00000487026 TRIM63Q969Q1 353 aa17.75■□□□□ 0.43
LIME1-206ENST00000487026 SLC35E1Q96K37 410 aa17.75■□□□□ 0.43
LIME1-206ENST00000487026 XCL2Q9UBD3 114 aa17.75■□□□□ 0.43
LIME1-206ENST00000487026 APLNQ9ULZ1 77 aa17.75■□□□□ 0.43
LIME1-206ENST00000487026 H3BMM0 161 aa17.74■□□□□ 0.43
LIME1-206ENST00000487026 PITX3O75364 302 aa17.74■□□□□ 0.43
LIME1-206ENST00000487026 FAUP35544 74 aaKnown RBP17.74■□□□□ 0.43
LIME1-206ENST00000487026 Q6ZTC4 211 aa17.74■□□□□ 0.43
LIME1-206ENST00000487026 TOMM5Q8N4H5 51 aa17.74■□□□□ 0.43
LIME1-206ENST00000487026 C11orf94C9JXX5 98 aa17.73■□□□□ 0.43
LIME1-206ENST00000487026 VAMP1P23763 118 aa17.73■□□□□ 0.43
LIME1-206ENST00000487026 ATP5IP56385 69 aaPredicted RBP17.73■□□□□ 0.43
LIME1-206ENST00000487026 OR2F1Q13607 317 aa17.73■□□□□ 0.43
LIME1-206ENST00000487026 TMEM128Q5BJH2 165 aa17.73■□□□□ 0.43
LIME1-206ENST00000487026 SEPSECSQ9HD40 501 aaKnown RBP17.73■□□□□ 0.43
LIME1-206ENST00000487026 PAIP2BQ9ULR5 123 aaKnown RBP17.73■□□□□ 0.43
LIME1-206ENST00000487026 V9GYH0 126 aa17.73■□□□□ 0.43
LIME1-206ENST00000487026 LYZP61626 148 aa17.72■□□□□ 0.43
LIME1-206ENST00000487026 GDF5OSQ5U4N7 250 aa17.72■□□□□ 0.43
LIME1-206ENST00000487026 WDR12Q9GZL7 423 aaKnown RBP17.72■□□□□ 0.43
LIME1-206ENST00000487026 CELA1Q9UNI1 258 aa17.72■□□□□ 0.43
LIME1-206ENST00000487026 IGKV3-20P01619 116 aa17.71■□□□□ 0.43
LIME1-206ENST00000487026 AP3S2P59780 193 aa17.71■□□□□ 0.43
LIME1-206ENST00000487026 NUTF2P61970 127 aaKnown RBP17.71■□□□□ 0.43
LIME1-206ENST00000487026 ZNF767PQ75MW2 155 aa17.71■□□□□ 0.43
LIME1-206ENST00000487026 LINC00052Q96N35 136 aa17.71■□□□□ 0.43
LIME1-206ENST00000487026 MAGT1Q9H0U3 335 aa17.71■□□□□ 0.43
LIME1-206ENST00000487026 DUXBA0A1W2PPF3 345 aa17.7■□□□□ 0.42
LIME1-206ENST00000487026 TCTAP57738 103 aa17.7■□□□□ 0.42
LIME1-206ENST00000487026 RAB11AP62491 216 aa17.7■□□□□ 0.42
LIME1-206ENST00000487026 ZNF79Q15937 498 aa17.7■□□□□ 0.42
LIME1-206ENST00000487026 OR8G2PQ6IF36 304 aa17.7■□□□□ 0.42
LIME1-206ENST00000487026 NDUFA13Q9P0J0 144 aa17.7■□□□□ 0.42
LIME1-206ENST00000487026 DNAH6Q9C0G6 4158 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 TRAV10A0A0B4J240 114 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 SNRPGP15A8MWD9 76 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 HLA-DRB4P13762 266 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 NKX2-1P43699 371 aaPredicted RBP17.69■□□□□ 0.42
LIME1-206ENST00000487026 FXYD7P58549 80 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 LRTM2Q8N967 370 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 C1QTNF4Q9BXJ3 329 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 PFDN2Q9UHV9 154 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 HLA-DRB4X5D2U9 266 aa17.69■□□□□ 0.42
LIME1-206ENST00000487026 IGKV1OR2-108A0A075B7D4 117 aa17.68■□□□□ 0.42
LIME1-206ENST00000487026 CCDC160A6NGH7 325 aa17.68■□□□□ 0.42
LIME1-206ENST00000487026 NUP62P37198 522 aaPredicted RBP17.68■□□□□ 0.42
LIME1-206ENST00000487026 PPP1R1AQ13522 171 aa17.68■□□□□ 0.42
LIME1-206ENST00000487026 CENPSQ8N2Z9 138 aa17.68■□□□□ 0.42
LIME1-206ENST00000487026 PPP1R14BQ96C90 147 aa17.68■□□□□ 0.42
LIME1-206ENST00000487026 PIGBOS1A0A0B4J2F0 54 aa17.67■□□□□ 0.42
LIME1-206ENST00000487026 WRBO00258 174 aa17.67■□□□□ 0.42
LIME1-206ENST00000487026 SFT2D2O95562 160 aa17.67■□□□□ 0.42
LIME1-206ENST00000487026 HOXB5P09067 269 aa17.67■□□□□ 0.42
LIME1-206ENST00000487026 C12orf74Q32Q52 190 aa17.67■□□□□ 0.42
LIME1-206ENST00000487026 TRGV9Q99603 122 aa17.67■□□□□ 0.42
LIME1-206ENST00000487026 SLC25A21Q9BQT8 299 aaPredicted RBP17.67■□□□□ 0.42
LIME1-206ENST00000487026 IGHV4-4A0A075B6R2 117 aa17.66■□□□□ 0.42
LIME1-206ENST00000487026 FABP1P07148 127 aa17.66■□□□□ 0.42
LIME1-206ENST00000487026 SLC25A6P12236 298 aa17.66■□□□□ 0.42
LIME1-206ENST00000487026 S100A5P33763 92 aa17.66■□□□□ 0.42
LIME1-206ENST00000487026 ID1P41134 155 aa17.66■□□□□ 0.42
LIME1-206ENST00000487026 TMED3Q9Y3Q3 217 aa17.66■□□□□ 0.42
LIME1-206ENST00000487026 SOCS3O14543 225 aa17.65■□□□□ 0.42
LIME1-206ENST00000487026 SYNGR2O43760 224 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms