RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZNF818PQ6ZRF7 136 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 LINC00336Q6ZUF6 198 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 GVQW1Q8N7I0 195 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 OR13F1Q8NGS4 319 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 OR1P1Q8NH06 330 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 BORCS5Q969J3 196 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 LSM10Q969L4 123 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 TRIM63Q969Q1 353 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM56Q96MV1 263 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 CMTM3Q96MX0 182 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 TXN2Q99757 166 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 RHBDL2Q9NX52 303 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 FKBP11Q9NYL4 201 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 COMMD9Q9P000 198 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 TP53TG3Q9ULZ0 132 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 VPS13DQ5THJ4 4388 aa2.84□□□□□ -1.96
SNRNP40-205ENST00000486941 RYR1P21817 5038 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 DNAH6Q9C0G6 4158 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 TRAV18A0A075B6X5 111 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 IGHV3-21A0A0B4J1V1 117 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 TRAV2A0A0B4J234 112 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 SMIM30A4D0T7 59 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 IGLL5B9A064 214 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 I3L2K1 104 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 DEFB4AO15263 64 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 PGLYRP1O75594 196 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 SNAPC5O75971 98 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 YIF1AO95070 293 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 CA1P00915 261 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 KRASP01116 189 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 PTHLHP12272 177 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 MIFP14174 115 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 GNRHRP30968 328 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 LPAR6P43657 344 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 CBX5P45973 191 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 TFPI2P48307 235 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 MFAP4P55083 255 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 FXYD4P59646 89 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 RIGQ13278 110 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 AADACL3Q5VUY0 350 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 SFXN4Q6P4A7 337 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 TCF24Q7RTU0 167 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 Q8NAQ8 132 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 UBAC2Q8NBM4 344 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 DUSP18Q8NEJ0 188 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 OR5AP2Q8NGF4 316 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 OR51H1Q8NH63 302 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 LGALS14Q8TCE9 139 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 TSC22D3Q99576 134 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 GINS3Q9BRX5 216 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 HINT2Q9BX68 163 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 NXF2Q9GZY0 626 aaKnown RBP2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 VSIRQ9H7M9 311 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 AUNIPQ9H7T9 357 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 DIABLOQ9NR28 239 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 FAM212BQ9NTI7 297 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 TXNL4BQ9NX01 149 aaKnown RBP2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 DAPK2Q9UIK4 370 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 PRNDQ9UKY0 176 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 BLOC1S6Q9UL45 172 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 OR51B2Q9Y5P1 312 aa2.83□□□□□ -1.96
SNRNP40-205ENST00000486941 IGKV3-7A0A075B6H7 116 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 IGHV3OR16-13A0A075B7E8 117 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 IGHV3-49A0A0A0MS15 119 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 IGHV3-74A0A0B4J1X5 117 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 TRAV10A0A0B4J240 114 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 ZNF705EA8MWA4 302 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 DNASE2O00115 360 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 GPR31O00270 319 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 ST8SIA3O43173 380 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 XRCC3O43542 346 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 GNG7O60262 68 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 MT-CO2P00403 227 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 RLN1P04808 185 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 EIF4EP06730 217 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 GIG44P09565 113 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 RBMY1A1P0DJD3 496 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 RBMY1CP0DJD4 496 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 SPP1P10451 314 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 HLA-DMBP28068 263 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 SDC2P34741 201 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 G6PCP35575 357 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 NPBWR1P48145 328 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 DEFB131AP59861 70 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 GABARAPL2P60520 117 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 HERV-K104P61576 105 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 PRCDQ00LT1 54 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 UBE2V1Q13404 147 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 RBMY1FQ15415 496 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 UBE2UQ5VVX9 321 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 PVRIGQ6DKI7 326 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 MORN3Q6PF18 240 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 TOMM20LQ6UXN7 152 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 Q6ZRP5 223 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 TMEM17Q86X19 198 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 STHQ8IWL8 128 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 CMTM1Q8IZ96 169 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 CENPSQ8N2Z9 138 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 POM121L12Q8N7R1 296 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 TSPAN14Q8NG11 270 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms