RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 FABP1P07148 127 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 LYL1P12980 280 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 NUP62P37198 522 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-218ENST00000486704 NKX2-1P43699 371 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-218ENST00000486704 RPL11P62913 178 aaKnown RBP11.79□□□□□ -0.52
HDAC8-218ENST00000486704 OR8G2PQ6IF36 304 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 APRG1Q8IVJ8 170 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 THAP8Q8NA92 274 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 RNF125Q96EQ8 232 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 TRGV9Q99603 122 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 OVOL2Q9BRP0 275 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 NUDT15Q9NV35 164 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 RABAC1Q9UI14 185 aa11.79□□□□□ -0.52
HDAC8-218ENST00000486704 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
HDAC8-218ENST00000486704 BUB3O43684 328 aa11.78□□□□□ -0.52
HDAC8-218ENST00000486704 POLR2GP62487 172 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDAC8-218ENST00000486704 SPANXN5Q5MJ07 72 aa11.78□□□□□ -0.52
HDAC8-218ENST00000486704 WFDC3Q8IUB2 231 aa11.78□□□□□ -0.52
HDAC8-218ENST00000486704 STXBP6Q8NFX7 210 aa11.78□□□□□ -0.52
HDAC8-218ENST00000486704 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
HDAC8-218ENST00000486704 PAIP2BQ9ULR5 123 aaKnown RBP11.78□□□□□ -0.52
HDAC8-218ENST00000486704 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.52
HDAC8-218ENST00000486704 IGKV1OR2-108A0A075B7D4 117 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 H3BP45 60 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 AP2S1P53680 142 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-218ENST00000486704 ZNF90Q03938 601 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 ASAH1Q13510 395 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 ZNF124Q15973 351 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 IAH1Q2TAA2 248 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-218ENST00000486704 FAM24BQ8N5W8 94 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 STPG3Q8N7X2 389 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 SMIM8Q96KF7 97 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 WDR12Q9GZL7 423 aaKnown RBP11.77□□□□□ -0.53
HDAC8-218ENST00000486704 TBC1D24Q9ULP9 559 aa11.77□□□□□ -0.53
HDAC8-218ENST00000486704 TRAV6A0A075B6T7 132 aa11.76□□□□□ -0.53
HDAC8-218ENST00000486704 SSSCA1O60232 199 aa11.76□□□□□ -0.53
HDAC8-218ENST00000486704 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
HDAC8-218ENST00000486704 DEFB131AP59861 70 aa11.76□□□□□ -0.53
HDAC8-218ENST00000486704 DEFB135Q30KP9 77 aa11.76□□□□□ -0.53
HDAC8-218ENST00000486704 MZT2BQ6NZ67 158 aa11.76□□□□□ -0.53
HDAC8-218ENST00000486704 ZBTB8BQ8NAP8 495 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-218ENST00000486704 ZNF431Q8TF32 576 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-218ENST00000486704 RAB40CQ96S21 281 aa11.76□□□□□ -0.53
HDAC8-218ENST00000486704 PFDN2Q9UHV9 154 aa11.76□□□□□ -0.53
HDAC8-218ENST00000486704 FAM240BA0A1B0GVZ2 78 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 SPRY2O43597 315 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 CFDP00746 253 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-218ENST00000486704 TAS2R30P59541 319 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 ZNF846Q147U1 533 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 ACOT7LQ6ZUV0 252 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 IL17DQ8TAD2 202 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 RNF183Q96D59 192 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 SEPSECSQ9HD40 501 aaKnown RBP11.75□□□□□ -0.53
HDAC8-218ENST00000486704 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
HDAC8-218ENST00000486704 RCL1Q9Y2P8 373 aaKnown RBP11.75□□□□□ -0.53
HDAC8-218ENST00000486704 AGRNO00468 2067 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 PMS2P5A8MQ11 134 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 SNRPGP15A8MWD9 76 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 TSC22D2O75157 780 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 UPK1BO75841 260 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 H2AFB2P0C5Z0 115 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 PAX9P55771 341 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 LYZP61626 148 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 LEMD1Q68G75 181 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 TMEM14EPQ6UXP3 125 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 CSTL1Q9H114 145 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 NRN1Q9NPD7 142 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
HDAC8-218ENST00000486704 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 SCGB1D2O95969 90 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 AKR1C1Q04828 323 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 TMEM144Q7Z5S9 345 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 SEC22CQ9BRL7 303 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 BATF3Q9NR55 127 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 FBXL17Q9UF56 701 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
HDAC8-218ENST00000486704 TENM2Q9NT68 2774 aa11.72□□□□□ -0.53
HDAC8-218ENST00000486704 CCSO14618 274 aa11.72□□□□□ -0.53
HDAC8-218ENST00000486704 MBPP02686 304 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-218ENST00000486704 DLK1P80370 383 aa11.72□□□□□ -0.53
HDAC8-218ENST00000486704 OR2F1Q13607 317 aa11.72□□□□□ -0.53
HDAC8-218ENST00000486704 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-218ENST00000486704 GATAD1Q8WUU5 269 aa11.72□□□□□ -0.53
HDAC8-218ENST00000486704 GSKIPQ9P0R6 139 aa11.72□□□□□ -0.53
HDAC8-218ENST00000486704 ATF4P18848 351 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-218ENST00000486704 ZFAND6Q6FIF0 208 aa11.71□□□□□ -0.53
HDAC8-218ENST00000486704 TRPT1Q86TN4 253 aaKnown RBP11.71□□□□□ -0.53
HDAC8-218ENST00000486704 STHQ8IWL8 128 aa11.71□□□□□ -0.53
HDAC8-218ENST00000486704 BPIFCQ8NFQ6 507 aa11.71□□□□□ -0.53
HDAC8-218ENST00000486704 C7orf66A4D0T2 115 aa11.7□□□□□ -0.54
HDAC8-218ENST00000486704 CCNKO75909 580 aa11.7□□□□□ -0.54
HDAC8-218ENST00000486704 IL5P05113 134 aa11.7□□□□□ -0.54
HDAC8-218ENST00000486704 METTL15P1P0C7V9 234 aa11.7□□□□□ -0.54
HDAC8-218ENST00000486704 SNRPD3P62318 126 aaKnown RBP11.7□□□□□ -0.54
HDAC8-218ENST00000486704 OR10P1Q8NGE3 313 aa11.7□□□□□ -0.54
HDAC8-218ENST00000486704 ENKURQ8TC29 256 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms