RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MYCNOSP40205 109 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 KLF5Q13887 457 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-229ENST00000486665 RPEL1Q2QD12 228 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 UNQ9165/PRO28630Q6UXU0 137 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 ZNF600Q6ZNG1 722 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 GPHB5Q86YW7 130 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 ARPC5LQ9BPX5 153 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 BOLA1Q9Y3E2 137 aa9.77□□□□□ -0.85
HDAC6-229ENST00000486665 PUS1Q9Y606 427 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC6-229ENST00000486665 BCL2L11O43521 198 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 TOMM40O96008 361 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 LINC00869P0C866 280 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 ZP3P21754 424 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 CAMLGP49069 296 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 SYNJ2BPP57105 145 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 RELQ04864 619 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-229ENST00000486665 BPIFCQ8NFQ6 507 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 SCGB1C1Q8TD33 95 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 Q8WTZ3 238 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 DLX4Q92988 240 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-229ENST00000486665 RCC1LQ96I51 464 aaKnown RBP9.76□□□□□ -0.85
HDAC6-229ENST00000486665 GGTLC1Q9BX51 225 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 NPCDR1Q9BY65 106 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 PARD6GQ9BYG4 376 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-229ENST00000486665 ZFAND3Q9H8U3 227 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
HDAC6-229ENST00000486665 KANTRA0A1W2PQU2 76 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 WI2-2373I1.2A0A1W2PRP0 233 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 ZNF320A2RRD8 509 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 G3V4G9 280 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 NDUFA4O00483 81 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 MPDU1O75352 247 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 YIF1AO95070 293 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 PRB2P02812 416 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-229ENST00000486665 RAB31Q13636 194 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 OPCMLQ14982 345 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 MIC13Q5XKP0 118 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 OR4F17Q8NGA8 305 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 OR4F4Q96R69 305 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 RSG1Q9BU20 258 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 ARV1Q9H2C2 271 aa9.75□□□□□ -0.85
HDAC6-229ENST00000486665 BORCS7-ASMTA0A0B4J1R7 106 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
HDAC6-229ENST00000486665 SCGB2A1O75556 95 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 JTBO76095 146 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 HNRNPCP07910 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC6-229ENST00000486665 EDN2P20800 178 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 ATP6V0CP27449 155 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 RPL29P47914 159 aaKnown RBP9.74□□□□□ -0.85
HDAC6-229ENST00000486665 SELENOTP62341 195 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 PRR20EP86478 221 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 PRR20CP86479 221 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 PRR20DP86480 221 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 PRR20BP86481 221 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 PRR20AP86496 221 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 ZNF266Q14584 549 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 FAM106AQ4KMX7 169 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 TM4SF20Q53R12 229 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 HSD17B11Q8NBQ5 300 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 OR51G1Q8NGK1 321 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 TMEM190Q8WZ59 177 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 C20orf24Q9BUV8 137 aa9.74□□□□□ -0.85
HDAC6-229ENST00000486665 ZNF471Q9BX82 626 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-229ENST00000486665 LGALS9O00182 355 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 PF4P02776 101 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 IL4P05112 153 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 FABP1P07148 127 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 USF2Q15853 346 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-229ENST00000486665 BEAN1Q3B7T3 259 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 PATE2Q6UY27 113 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 REC114Q7Z4M0 266 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 STPG3Q8N7X2 389 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 PXMP4Q9Y6I8 212 aa9.73□□□□□ -0.85
HDAC6-229ENST00000486665 KMT2CQ8NEZ4 4911 aaKnown RBP9.73□□□□□ -0.85
HDAC6-229ENST00000486665 ORM2P19652 201 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 LYZP61626 148 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 B2MP61769 119 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 IL34Q6ZMJ4 242 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 ZNF709Q8N972 641 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 RNF125Q96EQ8 232 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 PBDC1Q9BVG4 233 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 SLC39A9Q9NUM3 307 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 PLA2G2EQ9NZK7 142 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 DOK5Q9P104 306 aa9.72□□□□□ -0.85
HDAC6-229ENST00000486665 IGHV3-49A0A0A0MS15 119 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 TMEM213A2RRL7 107 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 K7EMT4 169 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 OVOL1O14753 267 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 CFDP00746 253 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-229ENST00000486665 APOHP02749 345 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-229ENST00000486665 PLP1P60201 277 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 GCSAMLQ5JQS6 135 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 ADAMTSL5Q6ZMM2 481 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 OR9G4Q8NGQ1 327 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 OR1B1Q8NGR6 318 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms