RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 A8MWP6 167 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 INS-IGF2F8WCM5 200 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 CA2P00918 260 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 FSHBP01225 129 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 OR5G3P0C626 314 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 ESDP10768 282 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 CRISP2P16562 243 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 NPPCP23582 126 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 ERVFC1-1P60608 527 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 USF2Q15853 346 aaPredicted RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 TMEM183BQ1AE95 376 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 C17orf58Q2M2W7 97 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 RASL11AQ6T310 242 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 ABHD12Q8N2K0 398 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 OR8B3Q8NGG8 313 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 OR4P4Q8NGL7 312 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 OR1L6Q8NGR2 347 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 EAF1Q96JC9 268 aaPredicted RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 OR8B2Q96RD0 313 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 DCTN5Q9BTE1 182 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 COMMD5Q9GZQ3 224 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 PRO1933Q9H354 126 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 ESM1Q9NQ30 184 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 NAGKQ9UJ70 344 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 RPUSD1Q9UJJ7 312 aaKnown RBP7.25□□□□□ -1.25
COL12A1-208ENST00000486533 PPIAL4AQ9Y536 164 aa7.25□□□□□ -1.25
COL12A1-208ENST00000486533 IGHV3OR15-7A0A075B7D8 119 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 HELTA6NFD8 242 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 Q0VG73 95 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 CT45A1Q5HYN5 189 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 FAM162BQ5T6X4 162 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 TEX36Q5VZQ5 186 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 ETFRF1Q6IPR1 90 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 SLC25A48Q6ZT89 311 aaKnown RBP7.24□□□□□ -1.25
COL12A1-208ENST00000486533 SIGLECL1Q8N7X8 197 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 C3orf56Q8N813 242 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 C8orf31Q8N9H6 132 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF439Q8NDP4 499 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 STXBP6Q8NFX7 210 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 CT45A3Q8NHU0 189 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 SSMEM1Q8WWF3 244 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF714Q96N38 554 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 DUX5Q96PT3 197 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 NABP2Q9BQ15 211 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 HINT2Q9BX68 163 aa7.24□□□□□ -1.25
COL12A1-208ENST00000486533 MRPL18Q9H0U6 180 aaKnown RBP7.24□□□□□ -1.25
COL12A1-208ENST00000486533 IGHV3OR16-10A0A075B7F0 116 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 IGHV2-70DA0A0C4DH43 119 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 M0R143 59 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 C8orf88P0DMB2 117 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 LGALS4P56470 323 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 HOXA4Q00056 320 aaPredicted RBP7.23□□□□□ -1.25
COL12A1-208ENST00000486533 GCSAMLQ5JQS6 135 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 OR10J3Q5JRS4 329 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 KLF17Q5JT82 389 aaPredicted RBP7.23□□□□□ -1.25
COL12A1-208ENST00000486533 C1orf194Q5T5A4 169 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF788Q6ZQV5 615 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 BAGE2Q86Y30 109 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 PDPNQ86YL7 162 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 MMD2Q8IY49 270 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 ZNRF1Q8ND25 227 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 OCC1Q8TAD7 63 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 SAMD10Q9BYL1 202 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF586Q9NXT0 402 aa7.23□□□□□ -1.25
COL12A1-208ENST00000486533 YTHDF2Q9Y5A9 579 aaKnown RBP7.23□□□□□ -1.25
COL12A1-208ENST00000486533 TRAV40A0A0B4J280 105 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 KIR2DL5BA0A0G2JN68 375 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 KIR2DL5BA0A0G2JPC4 375 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 TMEM89A2RUT3 159 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 DNAJC9-AS1A6NH13 148 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
COL12A1-208ENST00000486533 FCN1O00602 326 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 ISLRO14498 428 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 OR7C2O60412 319 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 PROP1O75360 226 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 FSTL3O95633 263 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF705DP0CH99 300 aaPredicted RBP7.22□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF705BP0CI00 300 aaPredicted RBP7.22□□□□□ -1.25
COL12A1-208ENST00000486533 IGHV4-38-2P0DP08 117 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 ADMP35318 185 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 COMPP49747 757 aaPredicted RBP7.22□□□□□ -1.25
COL12A1-208ENST00000486533 PAX8Q06710 450 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 CD69Q07108 199 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 PSG5Q15238 335 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 HLA-DRB5Q30154 266 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 CENPWQ5EE01 88 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 LYPD2Q6UXB3 125 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF833PQ6ZTB9 187 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 VKORC1L1Q8N0U8 176 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 KIR2DL5AQ8N109 375 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 BCL6BQ8N143 479 aaPredicted RBP7.22□□□□□ -1.25
COL12A1-208ENST00000486533 SMIM12Q96EX1 92 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 GAFA1Q96PS6 74 aa7.22□□□□□ -1.25
COL12A1-208ENST00000486533 TRAV3A0A0B4J244 114 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 SNURFLB1AK76 121 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 TFF1P04155 84 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 AMY1AP04745 511 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms