RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 DEFB4AO15263 64 aa16.33■□□□□ 0.2
SREBF1-214ENST00000486311 IFNA4P05014 189 aa16.33■□□□□ 0.2
SREBF1-214ENST00000486311 YPEL3P61236 119 aaPredicted RBP16.33■□□□□ 0.2
SREBF1-214ENST00000486311 TMEM41BQ5BJD5 291 aa16.33■□□□□ 0.2
SREBF1-214ENST00000486311 CACFD1Q9UGQ2 172 aa16.33■□□□□ 0.2
SREBF1-214ENST00000486311 KCNIP3Q9Y2W7 256 aa16.33■□□□□ 0.2
SREBF1-214ENST00000486311 TRAV6A0A075B6T7 132 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 HELTA6NFD8 242 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 ZNF688P0C7X2 276 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 SPP1P10451 314 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 OR10J1P30954 320 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 TMEM128Q5BJH2 165 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 MORN3Q6PF18 240 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-214ENST00000486311 RPP25LQ8N5L8 163 aaKnown RBP16.32■□□□□ 0.2
SREBF1-214ENST00000486311 Q8NAQ8 132 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 IL22RA2Q969J5 263 aa16.32■□□□□ 0.2
SREBF1-214ENST00000486311 PIGBOS1A0A0B4J2F0 54 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 KNCNA6PVL3 124 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 HNRNPCP07910 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
SREBF1-214ENST00000486311 ANXA3P12429 323 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 AKR1C4P17516 323 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 EIF2B2P49770 351 aaKnown RBP16.31■□□□□ 0.2
SREBF1-214ENST00000486311 NMSQ5H8A3 153 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 ETFRF1Q6IPR1 90 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 C16orf54Q6UWD8 224 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 GLMPQ8WWB7 406 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 FLVCR2Q9UPI3 526 aa16.31■□□□□ 0.2
SREBF1-214ENST00000486311 INMT-MINDY4F8WBC2 141 aa16.3■□□□□ 0.2
SREBF1-214ENST00000486311 SULT1A3P0DMM9 295 aa16.3■□□□□ 0.2
SREBF1-214ENST00000486311 SULT1A4P0DMN0 295 aa16.3■□□□□ 0.2
SREBF1-214ENST00000486311 NPY1RP25929 384 aa16.3■□□□□ 0.2
SREBF1-214ENST00000486311 AP2S1P53680 142 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-214ENST00000486311 NOXA1Q86UR1 476 aa16.3■□□□□ 0.2
SREBF1-214ENST00000486311 MARVELD1Q9BSK0 173 aa16.3■□□□□ 0.2
SREBF1-214ENST00000486311 PRAF2O60831 178 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 DEDDO75618 318 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 C4BPBP20851 252 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 DHRS2Q13268 280 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 OXA1LQ15070 435 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 USF2Q15853 346 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-214ENST00000486311 C4orf46Q504U0 113 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 ACTL10Q5JWF8 245 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 C2CD4CQ8TF44 421 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 NPIPB3Q92617 1050 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 HRH4Q9H3N8 390 aa16.29■□□□□ 0.2
SREBF1-214ENST00000486311 NXPH3O95157 252 aa16.28■□□□□ 0.2
SREBF1-214ENST00000486311 IL4P05112 153 aa16.28■□□□□ 0.2
SREBF1-214ENST00000486311 ANXA7P20073 488 aaKnown RBP16.28■□□□□ 0.2
SREBF1-214ENST00000486311 VAMP1P23763 118 aa16.28■□□□□ 0.2
SREBF1-214ENST00000486311 GPN1Q9HCN4 374 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-214ENST00000486311 PRR13Q9NZ81 148 aa16.28■□□□□ 0.2
SREBF1-214ENST00000486311 IGHV4-28A0A0C4DH34 117 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 ZNF705EA8MWA4 302 aaPredicted RBP16.27■□□□□ 0.2
SREBF1-214ENST00000486311 TOMM40O96008 361 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 IL5P05113 134 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 OR4E1P0C645 316 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 RBMY1A1P0DJD3 496 aaKnown RBP16.27■□□□□ 0.2
SREBF1-214ENST00000486311 RBMY1CP0DJD4 496 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 MIFP14174 115 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 TCTAP57738 103 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 SRPXP78539 464 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 RBMY1FQ15415 496 aaKnown RBP16.27■□□□□ 0.2
SREBF1-214ENST00000486311 ACY3Q96HD9 319 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 HSPB7Q9UBY9 170 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 U3KQ87 197 aa16.27■□□□□ 0.2
SREBF1-214ENST00000486311 A0A0B4J2A0 478 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 IFNA10P01566 189 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 RD3LP0DJH9 198 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 PSMG4Q5JS54 123 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 RAB40CQ96S21 281 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 SEPSECSQ9HD40 501 aaKnown RBP16.26■□□□□ 0.19
SREBF1-214ENST00000486311 SHPKQ9UHJ6 478 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 X6R8D5 127 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 DNAH6Q9C0G6 4158 aa16.26■□□□□ 0.19
SREBF1-214ENST00000486311 C11orf94C9JXX5 98 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 BUB3O43684 328 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 SFT2D2O95562 160 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 SUPT4H1P63272 117 aaKnown RBP16.25■□□□□ 0.19
SREBF1-214ENST00000486311 PPP1R1AQ13522 171 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 SMCO1Q147U7 214 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 LYZL2Q7Z4W2 148 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 CSNK1G2-AS1Q8NCQ2 148 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 DTD1Q8TEA8 209 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 NRN1Q9NPD7 142 aa16.25■□□□□ 0.19
SREBF1-214ENST00000486311 FAM90A26D6RGX4 464 aa16.24■□□□□ 0.19
SREBF1-214ENST00000486311 PSG1P11464 419 aa16.24■□□□□ 0.19
SREBF1-214ENST00000486311 LGI3Q8N145 548 aa16.24■□□□□ 0.19
SREBF1-214ENST00000486311 COQ8AQ8NI60 647 aa16.24■□□□□ 0.19
SREBF1-214ENST00000486311 RBKSQ9H477 322 aa16.24■□□□□ 0.19
SREBF1-214ENST00000486311 C9orf170A2RU37 121 aa16.23■□□□□ 0.19
SREBF1-214ENST00000486311 ATP5IP56385 69 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-214ENST00000486311 SNRPD3P62318 126 aaKnown RBP16.23■□□□□ 0.19
SREBF1-214ENST00000486311 SIGLEC15Q6ZMC9 328 aa16.23■□□□□ 0.19
SREBF1-214ENST00000486311 CLEC5AQ9NY25 188 aa16.23■□□□□ 0.19
SREBF1-214ENST00000486311 APLNQ9ULZ1 77 aa16.23■□□□□ 0.19
SREBF1-214ENST00000486311 SNRPGP15A8MWD9 76 aa16.22■□□□□ 0.19
SREBF1-214ENST00000486311 HLA-DMBP28068 263 aa16.22■□□□□ 0.19
SREBF1-214ENST00000486311 OR51G1Q8NGK1 321 aa16.22■□□□□ 0.19
SREBF1-214ENST00000486311 ZNF431Q8TF32 576 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-214ENST00000486311 ELOA3CA0A087WX78 387 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms