RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 CSMD3Q7Z407 3707 aa16.13■□□□□ 0.17
HLA-F-228ENST00000486194 ZFP92A6NM28 416 aa16.12■□□□□ 0.17
HLA-F-228ENST00000486194 ZNF688P0C7X2 276 aa16.12■□□□□ 0.17
HLA-F-228ENST00000486194 SNRPD3P62318 126 aaKnown RBP16.11■□□□□ 0.17
HLA-F-228ENST00000486194 GAMTQ14353 236 aa16.11■□□□□ 0.17
HLA-F-228ENST00000486194 OR8G2PQ6IF36 304 aa16.11■□□□□ 0.17
HLA-F-228ENST00000486194 MORN3Q6PF18 240 aaPredicted RBP16.11■□□□□ 0.17
HLA-F-228ENST00000486194 OR11H2Q8NH07 326 aa16.11■□□□□ 0.17
HLA-F-228ENST00000486194 RNF125Q96EQ8 232 aa16.11■□□□□ 0.17
HLA-F-228ENST00000486194 BUB3O43684 328 aa16.1■□□□□ 0.17
HLA-F-228ENST00000486194 SPP1P10451 314 aa16.1■□□□□ 0.17
HLA-F-228ENST00000486194 IAPPP10997 89 aa16.1■□□□□ 0.17
HLA-F-228ENST00000486194 EWSR1Q01844 656 aaKnown RBP eCLIP16.1■□□□□ 0.17
HLA-F-228ENST00000486194 CEMP1Q6PRD7 247 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-228ENST00000486194 SIGLEC15Q6ZMC9 328 aa16.1■□□□□ 0.17
HLA-F-228ENST00000486194 C11orf68Q9H3H3 251 aaKnown RBP16.1■□□□□ 0.17
HLA-F-228ENST00000486194 SEPSECSQ9HD40 501 aaKnown RBP16.1■□□□□ 0.17
HLA-F-228ENST00000486194 NRN1Q9NPD7 142 aa16.1■□□□□ 0.17
HLA-F-228ENST00000486194 PAIP2BQ9ULR5 123 aaKnown RBP16.1■□□□□ 0.17
HLA-F-228ENST00000486194 KLK5Q9Y337 293 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-228ENST00000486194 STARD9Q9P2P6 4700 aa16.09■□□□□ 0.17
HLA-F-228ENST00000486194 CENPXA8MT69 81 aa16.09■□□□□ 0.17
HLA-F-228ENST00000486194 SYNGR2O43760 224 aa16.09■□□□□ 0.17
HLA-F-228ENST00000486194 HOXB5P09067 269 aa16.09■□□□□ 0.17
HLA-F-228ENST00000486194 TRPT1Q86TN4 253 aaKnown RBP16.09■□□□□ 0.17
HLA-F-228ENST00000486194 PBDC1Q9BVG4 233 aa16.09■□□□□ 0.17
HLA-F-228ENST00000486194 NDUFB6O95139 128 aa16.08■□□□□ 0.16
HLA-F-228ENST00000486194 GGNBP1Q5YKI7 109 aa16.08■□□□□ 0.16
HLA-F-228ENST00000486194 MFFQ9GZY8 342 aa16.08■□□□□ 0.16
HLA-F-228ENST00000486194 SNRPGP15A8MWD9 76 aa16.07■□□□□ 0.16
HLA-F-228ENST00000486194 BAK1Q16611 211 aa16.07■□□□□ 0.16
HLA-F-228ENST00000486194 PSMG4Q5JS54 123 aa16.07■□□□□ 0.16
HLA-F-228ENST00000486194 ACTL10Q5JWF8 245 aa16.07■□□□□ 0.16
HLA-F-228ENST00000486194 COQ8AQ8NI60 647 aa16.07■□□□□ 0.16
HLA-F-228ENST00000486194 TRGV9Q99603 122 aa16.07■□□□□ 0.16
HLA-F-228ENST00000486194 C7orf50Q9BRJ6 194 aaKnown RBP16.07■□□□□ 0.16
HLA-F-228ENST00000486194 FBXL17Q9UF56 701 aa16.07■□□□□ 0.16
HLA-F-228ENST00000486194 IGKV1D-37A0A075B6S9 117 aa16.06■□□□□ 0.16
HLA-F-228ENST00000486194 C9orf170A2RU37 121 aa16.06■□□□□ 0.16
HLA-F-228ENST00000486194 KNCNA6PVL3 124 aa16.06■□□□□ 0.16
HLA-F-228ENST00000486194 CFDP00746 253 aaPredicted RBP16.06■□□□□ 0.16
HLA-F-228ENST00000486194 ZNF90Q03938 601 aa16.06■□□□□ 0.16
HLA-F-228ENST00000486194 MAGT1Q9H0U3 335 aa16.06■□□□□ 0.16
HLA-F-228ENST00000486194 WRBO00258 174 aa16.05■□□□□ 0.16
HLA-F-228ENST00000486194 IFNA21P01568 189 aa16.05■□□□□ 0.16
HLA-F-228ENST00000486194 LYZP61626 148 aa16.05■□□□□ 0.16
HLA-F-228ENST00000486194 NUTF2P61970 127 aaKnown RBP16.05■□□□□ 0.16
HLA-F-228ENST00000486194 C1orf194Q5T5A4 169 aa16.05■□□□□ 0.16
HLA-F-228ENST00000486194 C11orf45Q8TAV5 145 aa16.05■□□□□ 0.16
HLA-F-228ENST00000486194 RAB40CQ96S21 281 aa16.05■□□□□ 0.16
HLA-F-228ENST00000486194 NDUFA13Q9P0J0 144 aa16.05■□□□□ 0.16
HLA-F-228ENST00000486194 CNPY1Q3B7I2 92 aa16.04■□□□□ 0.16
HLA-F-228ENST00000486194 THAP8Q8NA92 274 aa16.04■□□□□ 0.16
HLA-F-228ENST00000486194 STRAPQ9Y3F4 350 aaKnown RBP16.04■□□□□ 0.16
HLA-F-228ENST00000486194 SACSQ9NZJ4 4579 aa16.03■□□□□ 0.16
HLA-F-228ENST00000486194 OR4E1P0C645 316 aa16.03■□□□□ 0.16
HLA-F-228ENST00000486194 SPANXN5Q5MJ07 72 aa16.03■□□□□ 0.16
HLA-F-228ENST00000486194 PHLDA1Q8WV24 401 aaPredicted RBP16.03■□□□□ 0.16
HLA-F-228ENST00000486194 LINC00476Q8WZB0 136 aa16.03■□□□□ 0.16
HLA-F-228ENST00000486194 PPP1R14BQ96C90 147 aa16.03■□□□□ 0.16
HLA-F-228ENST00000486194 LINC00854A0A1B0GVQ3 168 aa16.02■□□□□ 0.16
HLA-F-228ENST00000486194 GIG44P09565 113 aaPredicted RBP16.02■□□□□ 0.16
HLA-F-228ENST00000486194 S100A7P31151 101 aa16.02■□□□□ 0.16
HLA-F-228ENST00000486194 ID1P41134 155 aa16.02■□□□□ 0.16
HLA-F-228ENST00000486194 ID3Q02535 119 aa16.02■□□□□ 0.16
HLA-F-228ENST00000486194 C4orf46Q504U0 113 aa16.02■□□□□ 0.16
HLA-F-228ENST00000486194 C1QTNF4Q9BXJ3 329 aa16.02■□□□□ 0.16
HLA-F-228ENST00000486194 RYR2Q92736 4967 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 PRSS46E5RG02 174 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 ADAP1O75689 374 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 MIFP14174 115 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 NKX2-1P43699 371 aaPredicted RBP16.01■□□□□ 0.15
HLA-F-228ENST00000486194 OR2F1Q13607 317 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 SAMD13Q5VXD3 122 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 SDHCQ99643 169 aaPredicted RBP16.01■□□□□ 0.15
HLA-F-228ENST00000486194 SLC45A2Q9UMX9 530 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 FLVCR2Q9UPI3 526 aa16.01■□□□□ 0.15
HLA-F-228ENST00000486194 IL7P13232 177 aa16■□□□□ 0.15
HLA-F-228ENST00000486194 C4BPBP20851 252 aa16■□□□□ 0.15
HLA-F-228ENST00000486194 AKR1C1Q04828 323 aa16■□□□□ 0.15
HLA-F-228ENST00000486194 IGKV1OR2-108A0A075B7D4 117 aa15.99■□□□□ 0.15
HLA-F-228ENST00000486194 LY6G6CO95867 125 aa15.99■□□□□ 0.15
HLA-F-228ENST00000486194 PSMB3P49720 205 aa15.99■□□□□ 0.15
HLA-F-228ENST00000486194 OR8I2Q8N0Y5 310 aa15.99■□□□□ 0.15
HLA-F-228ENST00000486194 Q8NAQ8 132 aa15.99■□□□□ 0.15
HLA-F-228ENST00000486194 BPIFCQ8NFQ6 507 aa15.99■□□□□ 0.15
HLA-F-228ENST00000486194 PSENENQ9NZ42 101 aa15.99■□□□□ 0.15
HLA-F-228ENST00000486194 LYSTQ99698 3801 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 ZNF705EA8MWA4 302 aaPredicted RBP15.98■□□□□ 0.15
HLA-F-228ENST00000486194 H3BMM0 161 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 H3BP45 60 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 HLA-DRB4P13762 266 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 ANXA7P20073 488 aaKnown RBP15.98■□□□□ 0.15
HLA-F-228ENST00000486194 BTCP35070 178 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 NANOS2P60321 138 aaKnown RBP15.98■□□□□ 0.15
HLA-F-228ENST00000486194 POLR2GP62487 172 aaKnown RBP eCLIP15.98■□□□□ 0.15
HLA-F-228ENST00000486194 OR4D5Q8NGN0 318 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 HRH4Q9H3N8 390 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 TBC1D24Q9ULP9 559 aa15.98■□□□□ 0.15
HLA-F-228ENST00000486194 HLA-DRB4X5D2U9 266 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms