RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CLINT1Q14677 625 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 TM4SF20Q53R12 229 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 TOMM20LQ6UXN7 152 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 BPIFCQ8NFQ6 507 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 OR51G1Q8NGK1 321 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 METTL26Q96S19 204 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 PBDC1Q9BVG4 233 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 MRPL27Q9P0M9 148 aaKnown RBP8.68□□□□□ -1.02
NUP50-216ENST00000486184 PFDN2Q9UHV9 154 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 HSPB11Q9Y547 144 aa8.68□□□□□ -1.02
NUP50-216ENST00000486184 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 DFFBO76075 338 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 CSN3P07498 182 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 PSG1P11464 419 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 FOLR2P14207 255 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 CBLN1P23435 193 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 NPPCP23582 126 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 S100A7P31151 101 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 LYZP61626 148 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 SELENOTP62341 195 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 ZNF90Q03938 601 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 ZNF546Q86UE3 836 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 CHAC2Q8WUX2 184 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 TMEM231Q9H6L2 316 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 SIGLEC8Q9NYZ4 499 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 TECRQ9NZ01 308 aaKnown RBP8.67□□□□□ -1.02
NUP50-216ENST00000486184 PKD1L1Q8TDX9 2849 aa8.67□□□□□ -1.02
NUP50-216ENST00000486184 IGKV1D-37A0A075B6S9 117 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 A0A1W2PS18 150 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 G3V4G9 280 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 IFNA5P01569 189 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 FGF7P21781 194 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 VWC2Q2TAL6 325 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 BTNL8Q6UX41 500 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 CYP2G1PQ6ZSU1 146 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 AKAP14Q86UN6 197 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 PPP1R14BQ96C90 147 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 RNF125Q96EQ8 232 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 GRAMD2BQ96HH9 432 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 ATP5SQ99766 215 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 SMIM3Q9BZL3 60 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 RABAC1Q9UI14 185 aa8.66□□□□□ -1.02
NUP50-216ENST00000486184 IGHV3-49A0A0A0MS15 119 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 IGHV7-4-1A0A0J9YVY3 117 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 AGPAT2O15120 278 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 MPDU1O75352 247 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 HNRNPCP07910 306 aaKnown RBP eCLIP8.65□□□□□ -1.02
NUP50-216ENST00000486184 CAMLGP49069 296 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 AP2S1P53680 142 aaPredicted RBP8.65□□□□□ -1.02
NUP50-216ENST00000486184 Q5BKY6 102 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 LCN12Q6JVE5 192 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 IL34Q6ZMJ4 242 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 RBPMS2Q6ZRY4 209 aaKnown RBP8.65□□□□□ -1.02
NUP50-216ENST00000486184 S100A7AQ86SG5 101 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 ZNF709Q8N972 641 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 OR2K2Q8NGT1 345 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 SCGB1C1Q8TD33 95 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 AQP10Q96PS8 301 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 KCNIP2Q9NS61 270 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 WDR83OSQ9Y284 106 aa8.65□□□□□ -1.02
NUP50-216ENST00000486184 WI2-2373I1.2A0A1W2PRP0 233 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 C17orf112F2Z3M2 114 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 SMLR1H3BR10 107 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 ARPC5O15511 151 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 WIPF1O43516 503 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 LINC00869P0C866 280 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 EDN2P20800 178 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 EIF2B2P49770 351 aaKnown RBP8.64□□□□□ -1.03
NUP50-216ENST00000486184 USF2Q15853 346 aaPredicted RBP8.64□□□□□ -1.03
NUP50-216ENST00000486184 LAMTOR1Q6IAA8 161 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 OR1B1Q8NGR6 318 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 MGST2Q99735 147 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 RHPN1-AS1Q9BWJ2 59 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 SMPXQ9UHP9 88 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 TNFSF18Q9UNG2 199 aa8.64□□□□□ -1.03
NUP50-216ENST00000486184 LSM4Q9Y4Z0 139 aaKnown RBP8.64□□□□□ -1.03
NUP50-216ENST00000486184 IGHV3OR16-13A0A075B7E8 117 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 IGHV3-74A0A0B4J1X5 117 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 CD5P06127 495 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 OR5G3P0C626 314 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 C8orf88P0DMB2 117 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 ORM2P19652 201 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 GATA2P23769 480 aaPredicted RBP8.63□□□□□ -1.03
NUP50-216ENST00000486184 CRYBB3P26998 211 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 ZNF266Q14584 549 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 GUCA2BQ16661 112 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 DEFB114Q30KQ6 69 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 CD300EQ496F6 205 aaPredicted RBP8.63□□□□□ -1.03
NUP50-216ENST00000486184 PXDC1Q5TGL8 231 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 Q6ZRG5 221 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 ZNF414Q96IQ9 312 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 NPCDR1Q9BY65 106 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 MFFQ9GZY8 342 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 DOK5Q9P104 306 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 FBXL17Q9UF56 701 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 MLXQ9UH92 298 aa8.63□□□□□ -1.03
NUP50-216ENST00000486184 BORCS7-ASMTA0A0B4J1R7 106 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms