RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ARL16Q0P5N6 197 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 OXA1LQ15070 435 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 FCN2Q15485 313 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 LAMTOR1Q6IAA8 161 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 TMEM217Q8N7C4 229 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 THAP8Q8NA92 274 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 OR51G1Q8NGK1 321 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 PPP1R1CQ8WVI7 109 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 ST8SIA2Q92186 375 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 NARS2Q96I59 477 aaKnown RBP8.92□□□□□ -0.98
HPS4-214ENST00000485842 LYRM2Q9NU23 88 aaPredicted RBP8.92□□□□□ -0.98
HPS4-214ENST00000485842 OR5AC2Q9NZP5 309 aa8.92□□□□□ -0.98
HPS4-214ENST00000485842 IGKV3-7A0A075B6H7 116 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 TRAV25A0A0B4J276 109 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 IGSF23A1L1A6 192 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 HNRNPCP07910 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
HPS4-214ENST00000485842 CXCL3P19876 107 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 SULT1A1P50225 295 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 CD81P60033 236 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 LYZP61626 148 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 USF2Q15853 346 aaPredicted RBP8.91□□□□□ -0.98
HPS4-214ENST00000485842 TMEM144Q7Z5S9 345 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 STX12Q86Y82 276 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 LILRB2Q8N423 598 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 RNF125Q96EQ8 232 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 RNF2Q99496 336 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 TMEM231Q9H6L2 316 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 SMAD5-AS1Q9Y6J3 95 aa8.91□□□□□ -0.98
HPS4-214ENST00000485842 A0A1W2PS18 150 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 E5RGE8 158 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 H0YIZ8 118 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 PET100P0DJ07 73 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 CRYBB3P26998 211 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 TCF24Q7RTU0 167 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 TMEM252Q8N6L7 170 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 VSIRQ9H7M9 311 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 RABAC1Q9UI14 185 aa8.9□□□□□ -0.98
HPS4-214ENST00000485842 LSM4Q9Y4Z0 139 aaKnown RBP8.9□□□□□ -0.98
HPS4-214ENST00000485842 FNDC10F2Z333 226 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 TSPAN4O14817 238 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 DFFBO76075 338 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 MPC2O95563 127 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 CD7P09564 240 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 GATA2P23769 480 aaPredicted RBP8.89□□□□□ -0.99
HPS4-214ENST00000485842 P2RY1P47900 373 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 TFPI2P48307 235 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 RPL11P62913 178 aaKnown RBP8.89□□□□□ -0.99
HPS4-214ENST00000485842 HBG1P69891 147 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 HBG2P69892 147 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 CYP2G1PQ6ZSU1 146 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 Q8N1Y9 231 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 GBGT1Q8N5D6 347 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 BPIFCQ8NFQ6 507 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 OR11H7Q8NGC8 314 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 GRAMD2BQ96HH9 432 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 SPAG8Q99932 426 aaPredicted RBP8.89□□□□□ -0.99
HPS4-214ENST00000485842 NEURL2Q9BR09 285 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 NPVFQ9HCQ7 196 aa8.89□□□□□ -0.99
HPS4-214ENST00000485842 UBE2L5PA0A1B0GUS4 154 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 EIF2B2P49770 351 aaKnown RBP8.88□□□□□ -0.99
HPS4-214ENST00000485842 EWSR1Q01844 656 aaKnown RBP eCLIP8.88□□□□□ -0.99
HPS4-214ENST00000485842 TEPPQ6URK8 271 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 TMEM182Q6ZP80 229 aaPredicted RBP8.88□□□□□ -0.99
HPS4-214ENST00000485842 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 TMEM147Q9BVK8 224 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 GGACTQ9BVM4 153 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 SLC25A31Q9H0C2 315 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 WFDC10AQ9H1F0 79 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 UQCC1Q9NVA1 299 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 DOK5Q9P104 306 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 MBD2Q9UBB5 411 aa8.88□□□□□ -0.99
HPS4-214ENST00000485842 OR4C46A6NHA9 309 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 LINC00869P0C866 280 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 IGHV4-30-4P0DP06 118 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 ORM2P19652 201 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 S100A11P31949 105 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 NHLH2Q02577 135 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 FAM90A2PQ658T7 463 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 WFDC3Q8IUB2 231 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 STXBP6Q8NFX7 210 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 OR1B1Q8NGR6 318 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 RNF126Q9BV68 326 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 UBQLN2Q9UHD9 624 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 U3KQE9 123 aa8.87□□□□□ -0.99
HPS4-214ENST00000485842 DNASE2O00115 360 aaPredicted RBP8.86□□□□□ -0.99
HPS4-214ENST00000485842 AGPAT2O15120 278 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 CFDP00746 253 aaPredicted RBP8.86□□□□□ -0.99
HPS4-214ENST00000485842 CD5P06127 495 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 FRMD6-AS1P0C7T7 363 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 NUP62P37198 522 aaPredicted RBP8.86□□□□□ -0.99
HPS4-214ENST00000485842 SELENOTP62341 195 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 PAFAH1B2P68402 229 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 BAXQ07812 192 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 CLINT1Q14677 625 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 ATP6V1FQ16864 119 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 C16orf54Q6UWD8 224 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 DEFB125Q8N687 156 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 OR5C1Q8NGR4 320 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 THAP6Q8TBB0 222 aa8.86□□□□□ -0.99
HPS4-214ENST00000485842 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms