RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 FAUP35544 74 aaKnown RBP9.65□□□□□ -0.86
UBA3-210ENST00000485424 NUP62P37198 522 aaPredicted RBP9.65□□□□□ -0.86
UBA3-210ENST00000485424 CCR6P51684 374 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 SRPXP78539 464 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 SMCO1Q147U7 214 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 C16orf54Q6UWD8 224 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 SIGLEC15Q6ZMC9 328 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 OR1S1Q8NH92 325 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 DCANP1Q8TF63 244 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 TMEM56-RWDD3S4R434 201 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 U3KQ87 197 aa9.65□□□□□ -0.86
UBA3-210ENST00000485424 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 ANKRD20A5PA0PJZ0 165 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 TOMM40O96008 361 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 FABP1P07148 127 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 ALDH3B2P48448 385 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 LGI3Q8N145 548 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 Q8NAQ8 132 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 DTD1Q8TEA8 209 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 GLMPQ8WWB7 406 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 SLC35E1Q96K37 410 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 RAB40CQ96S21 281 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 PBDC1Q9BVG4 233 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 HRH4Q9H3N8 390 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 CLEC5AQ9NY25 188 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 PRR13Q9NZ81 148 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 TBC1D24Q9ULP9 559 aa9.64□□□□□ -0.87
UBA3-210ENST00000485424 TRAV10A0A0B4J240 114 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 A0A0B4J2A0 478 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 FABP12A6NFH5 140 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 ZFP92A6NM28 416 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 C4BPBP20851 252 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 TMBIM6P55061 237 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 KLF9Q13886 244 aaPredicted RBP9.63□□□□□ -0.87
UBA3-210ENST00000485424 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
UBA3-210ENST00000485424 NMSQ5H8A3 153 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 OR51G1Q8NGK1 321 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 PPP1R14BQ96C90 147 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 RBKSQ9H477 322 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 SHPKQ9UHJ6 478 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
UBA3-210ENST00000485424 U3KQE9 123 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 FAT2Q9NYQ8 4349 aa9.63□□□□□ -0.87
UBA3-210ENST00000485424 RYR1P21817 5038 aa9.62□□□□□ -0.87
UBA3-210ENST00000485424 DNAH17Q9UFH2 4485 aa9.62□□□□□ -0.87
UBA3-210ENST00000485424 DYNC2LI1Q8TCX1 351 aa9.62□□□□□ -0.87
UBA3-210ENST00000485424 RNF125Q96EQ8 232 aa9.62□□□□□ -0.87
UBA3-210ENST00000485424 SEPSECSQ9HD40 501 aaKnown RBP9.62□□□□□ -0.87
UBA3-210ENST00000485424 DNAH2Q9P225 4427 aa9.62□□□□□ -0.87
UBA3-210ENST00000485424 ZNF705EA8MWA4 302 aaPredicted RBP9.61□□□□□ -0.87
UBA3-210ENST00000485424 FAM90A26D6RGX4 464 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 BUB3O43684 328 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 RBMY1A1P0DJD3 496 aaKnown RBP9.61□□□□□ -0.87
UBA3-210ENST00000485424 RBMY1CP0DJD4 496 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 PSG1P11464 419 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 HLA-DMBP28068 263 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 ID1P41134 155 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 ATP5IP56385 69 aaPredicted RBP9.61□□□□□ -0.87
UBA3-210ENST00000485424 AP3S2P59780 193 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 RAB11AP62491 216 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 RBMY1FQ15415 496 aaKnown RBP9.61□□□□□ -0.87
UBA3-210ENST00000485424 LYZL2Q7Z4W2 148 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 TMED4Q7Z7H5 227 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 HSPB7Q9UBY9 170 aa9.61□□□□□ -0.87
UBA3-210ENST00000485424 MED6O75586 246 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 GIG44P09565 113 aaPredicted RBP9.6□□□□□ -0.87
UBA3-210ENST00000485424 LYZP61626 148 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 TOMM5Q8N4H5 51 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 MCFD2Q8NI22 146 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 COQ8AQ8NI60 647 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 TMEM170AQ8WVE7 144 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 LINC00052Q96N35 136 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 XCL2Q9UBD3 114 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 X6R8D5 127 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
UBA3-210ENST00000485424 DUXBA0A1W2PPF3 345 aa9.59□□□□□ -0.87
UBA3-210ENST00000485424 VAMP1P23763 118 aa9.59□□□□□ -0.87
UBA3-210ENST00000485424 TNFSF8P32971 234 aa9.59□□□□□ -0.87
UBA3-210ENST00000485424 GPX4P36969 197 aaPredicted RBP9.59□□□□□ -0.87
UBA3-210ENST00000485424 NKX2-1P43699 371 aaPredicted RBP9.59□□□□□ -0.87
UBA3-210ENST00000485424 RPP30P78346 268 aaKnown RBP9.59□□□□□ -0.87
UBA3-210ENST00000485424 PYDC2Q56P42 97 aa9.59□□□□□ -0.87
UBA3-210ENST00000485424 Q6ZTC4 211 aa9.59□□□□□ -0.87
UBA3-210ENST00000485424 APLNQ9ULZ1 77 aa9.59□□□□□ -0.87
UBA3-210ENST00000485424 PKD1P98161 4303 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 IGHV4-4A0A075B6R2 117 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 ELOA3CA0A087WX78 387 aaPredicted RBP9.58□□□□□ -0.88
UBA3-210ENST00000485424 CCDC160A6NGH7 325 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 SNRPGP15A8MWD9 76 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 H3BMM0 161 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 IAPPP10997 89 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 S100A7P31151 101 aa9.58□□□□□ -0.88
UBA3-210ENST00000485424 SUPT4H1P63272 117 aaKnown RBP9.58□□□□□ -0.88
UBA3-210ENST00000485424 GAMTQ14353 236 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms