RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SEPSECSQ9HD40 501 aaKnown RBP13.83□□□□□ -0.2
COL27A1-205ENST00000485397 KIAA1109Q2LD37 5005 aa13.83□□□□□ -0.2
COL27A1-205ENST00000485397 GSTZ1O43708 216 aaPredicted RBP13.82□□□□□ -0.2
COL27A1-205ENST00000485397 IL18Q14116 193 aa13.82□□□□□ -0.2
COL27A1-205ENST00000485397 CLVS1Q8IUQ0 354 aaPredicted RBP13.82□□□□□ -0.2
COL27A1-205ENST00000485397 IL22RA2Q969J5 263 aa13.82□□□□□ -0.2
COL27A1-205ENST00000485397 PRRT1Q99946 306 aa13.82□□□□□ -0.2
COL27A1-205ENST00000485397 CTDSPLO15194 276 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 GDF5OSQ5U4N7 250 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 GSG1LQ6UXU4 331 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 LGI3Q8N145 548 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 DTD1Q8TEA8 209 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 RNF125Q96EQ8 232 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 DIRAS2Q96HU8 199 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 PBDC1Q9BVG4 233 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 RBKSQ9H477 322 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 KCNIP3Q9Y2W7 256 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 U3KQ87 197 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
COL27A1-205ENST00000485397 FAT2Q9NYQ8 4349 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 IGKV3-20P01619 116 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 AMBPP02760 352 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 NKX2-1P43699 371 aaPredicted RBP13.8□□□□□ -0.2
COL27A1-205ENST00000485397 CCR6P51684 374 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 FXYD7P58549 80 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 KLF9Q13886 244 aaPredicted RBP13.8□□□□□ -0.2
COL27A1-205ENST00000485397 GPR141Q7Z602 305 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 HSPB7Q9UBY9 170 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 CACFD1Q9UGQ2 172 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 DNAH17Q9UFH2 4485 aa13.8□□□□□ -0.2
COL27A1-205ENST00000485397 DNAH2Q9P225 4427 aa13.79□□□□□ -0.2
COL27A1-205ENST00000485397 ANKRD20A5PA0PJZ0 165 aa13.79□□□□□ -0.2
COL27A1-205ENST00000485397 ALDH3B2P48448 385 aa13.79□□□□□ -0.2
COL27A1-205ENST00000485397 ZNF90Q03938 601 aa13.79□□□□□ -0.2
COL27A1-205ENST00000485397 SMCO1Q147U7 214 aa13.79□□□□□ -0.2
COL27A1-205ENST00000485397 ZNF705AQ6ZN79 300 aaPredicted RBP13.79□□□□□ -0.2
COL27A1-205ENST00000485397 LINC00052Q96N35 136 aa13.79□□□□□ -0.2
COL27A1-205ENST00000485397 WDR12Q9GZL7 423 aaKnown RBP13.79□□□□□ -0.2
COL27A1-205ENST00000485397 IGKV1D-37A0A075B6S9 117 aa13.78□□□□□ -0.2
COL27A1-205ENST00000485397 A0A0B4J2A0 478 aa13.78□□□□□ -0.2
COL27A1-205ENST00000485397 ZFP92A6NM28 416 aa13.78□□□□□ -0.2
COL27A1-205ENST00000485397 AKR1C4P17516 323 aa13.78□□□□□ -0.2
COL27A1-205ENST00000485397 SUPT4H1P63272 117 aaKnown RBP13.78□□□□□ -0.2
COL27A1-205ENST00000485397 SHPKQ9UHJ6 478 aa13.78□□□□□ -0.2
COL27A1-205ENST00000485397 SCP2D1Q9UJQ7 156 aa13.78□□□□□ -0.2
COL27A1-205ENST00000485397 IGHV3OR16-12A0A075B7B8 117 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 EMP1P54849 157 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 GAMTQ14353 236 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 OR8G2PQ6IF36 304 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 POM121L12Q8N7R1 296 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 NEU1Q99519 415 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 NDUFAF3Q9BU61 184 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 MRPS26Q9BYN8 205 aaKnown RBP13.77□□□□□ -0.21
COL27A1-205ENST00000485397 MCUBQ9NWR8 336 aa13.77□□□□□ -0.21
COL27A1-205ENST00000485397 ZNF705FA8MVS1 300 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-205ENST00000485397 ZNF705DP0CH99 300 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-205ENST00000485397 ZNF705BP0CI00 300 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-205ENST00000485397 GPX4P36969 197 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-205ENST00000485397 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-205ENST00000485397 LYZP61626 148 aa13.76□□□□□ -0.21
COL27A1-205ENST00000485397 LINC00336Q6ZUF6 198 aa13.76□□□□□ -0.21
COL27A1-205ENST00000485397 SLC35E1Q96K37 410 aa13.76□□□□□ -0.21
COL27A1-205ENST00000485397 SCGB3A2Q96PL1 93 aa13.76□□□□□ -0.21
COL27A1-205ENST00000485397 SAV1Q9H4B6 383 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-205ENST00000485397 RABL2AQ9UBK7 228 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-205ENST00000485397 RABL2BQ9UNT1 228 aa13.76□□□□□ -0.21
COL27A1-205ENST00000485397 M0R2N4 97 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 SOCS3O14543 225 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 SPART-AS1P0CW21 52 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 P0DMU3 169 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 FAM231AP0DMU4 169 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 FAM231CP0DMU5 169 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 ID1P41134 155 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 OR2F1Q13607 317 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 FOXI2Q6ZQN5 318 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 OR1S1Q8NH92 325 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 DYNC2LI1Q8TCX1 351 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 CCDC59Q9P031 241 aaKnown RBP13.75□□□□□ -0.21
COL27A1-205ENST00000485397 PFDN2Q9UHV9 154 aa13.75□□□□□ -0.21
COL27A1-205ENST00000485397 A0A1B0GVY2 172 aa13.74□□□□□ -0.21
COL27A1-205ENST00000485397 ATP5IP56385 69 aaPredicted RBP13.74□□□□□ -0.21
COL27A1-205ENST00000485397 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
COL27A1-205ENST00000485397 OR4B1Q8NGF8 309 aa13.74□□□□□ -0.21
COL27A1-205ENST00000485397 SLC35B3Q9H1N7 401 aa13.74□□□□□ -0.21
COL27A1-205ENST00000485397 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
COL27A1-205ENST00000485397 SMIM9A6NGZ8 99 aa13.73□□□□□ -0.21
COL27A1-205ENST00000485397 F6UB75 175 aa13.73□□□□□ -0.21
COL27A1-205ENST00000485397 IAPPP10997 89 aa13.73□□□□□ -0.21
COL27A1-205ENST00000485397 ANXA3P12429 323 aa13.73□□□□□ -0.21
COL27A1-205ENST00000485397 PSMB3P49720 205 aa13.73□□□□□ -0.21
COL27A1-205ENST00000485397 COQ8AQ8NI60 647 aa13.73□□□□□ -0.21
COL27A1-205ENST00000485397 RSL24D1Q9UHA3 163 aaKnown RBP13.73□□□□□ -0.21
COL27A1-205ENST00000485397 RFNGQ9Y644 331 aa13.73□□□□□ -0.21
COL27A1-205ENST00000485397 DYNC1H1Q14204 4646 aaKnown RBP13.73□□□□□ -0.21
COL27A1-205ENST00000485397 TMEM189A5PLL7 270 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 SNRPGP15A8MWD9 76 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 RTL8CO15255 209 aa13.72□□□□□ -0.21
COL27A1-205ENST00000485397 PITX3O75364 302 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms