RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 ZNF79Q15937 498 aa11.6□□□□□ -0.55
SIK3-211ENST00000485363 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
SIK3-211ENST00000485363 OR51G1Q8NGK1 321 aa11.6□□□□□ -0.55
SIK3-211ENST00000485363 ZFP92A6NM28 416 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 BUB3O43684 328 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 PITX3O75364 302 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 SLC25A6P12236 298 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 NUP62P37198 522 aaPredicted RBP11.59□□□□□ -0.55
SIK3-211ENST00000485363 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 ACTL10Q5JWF8 245 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 CCDC190Q86UF4 302 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 SLC35E1Q96K37 410 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 PFDN2Q9UHV9 154 aa11.59□□□□□ -0.55
SIK3-211ENST00000485363 FAM90A26D6RGX4 464 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 MED6O75586 246 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 SFT2D2O95562 160 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 FABP1P07148 127 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
SIK3-211ENST00000485363 RAB11AP62491 216 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 GAMTQ14353 236 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 SIGLEC15Q6ZMC9 328 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 RAB40CQ96S21 281 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 PBDC1Q9BVG4 233 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 SEPSECSQ9HD40 501 aaKnown RBP11.58□□□□□ -0.56
SIK3-211ENST00000485363 TMED3Q9Y3Q3 217 aa11.58□□□□□ -0.56
SIK3-211ENST00000485363 DEFB4AO15263 64 aa11.57□□□□□ -0.56
SIK3-211ENST00000485363 GIG44P09565 113 aaPredicted RBP11.57□□□□□ -0.56
SIK3-211ENST00000485363 IAPPP10997 89 aa11.57□□□□□ -0.56
SIK3-211ENST00000485363 NANOS2P60321 138 aaKnown RBP11.57□□□□□ -0.56
SIK3-211ENST00000485363 SPANXN2Q5MJ10 180 aa11.57□□□□□ -0.56
SIK3-211ENST00000485363 OR8G2PQ6IF36 304 aa11.57□□□□□ -0.56
SIK3-211ENST00000485363 CENPSQ8N2Z9 138 aa11.57□□□□□ -0.56
SIK3-211ENST00000485363 RBM38Q9H0Z9 239 aaKnown RBP11.57□□□□□ -0.56
SIK3-211ENST00000485363 FBXL17Q9UF56 701 aa11.57□□□□□ -0.56
SIK3-211ENST00000485363 IGKV1D-37A0A075B6S9 117 aa11.56□□□□□ -0.56
SIK3-211ENST00000485363 ZNF701M0R085 212 aaPredicted RBP11.56□□□□□ -0.56
SIK3-211ENST00000485363 C4BPBP20851 252 aa11.56□□□□□ -0.56
SIK3-211ENST00000485363 RPP30P78346 268 aaKnown RBP11.56□□□□□ -0.56
SIK3-211ENST00000485363 ZNF90Q03938 601 aa11.56□□□□□ -0.56
SIK3-211ENST00000485363 PPP1R1AQ13522 171 aa11.56□□□□□ -0.56
SIK3-211ENST00000485363 Q8NAQ8 132 aa11.56□□□□□ -0.56
SIK3-211ENST00000485363 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
SIK3-211ENST00000485363 PAIP2BQ9ULR5 123 aaKnown RBP11.56□□□□□ -0.56
SIK3-211ENST00000485363 MIFP14174 115 aa11.55□□□□□ -0.56
SIK3-211ENST00000485363 INPP1P49441 399 aa11.55□□□□□ -0.56
SIK3-211ENST00000485363 NUTF2P61970 127 aaKnown RBP11.55□□□□□ -0.56
SIK3-211ENST00000485363 SRRQ9GZT4 340 aa11.55□□□□□ -0.56
SIK3-211ENST00000485363 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 ZNF705EA8MWA4 302 aaPredicted RBP11.54□□□□□ -0.56
SIK3-211ENST00000485363 SNRPGP15A8MWD9 76 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 SYNGR2O43760 224 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 HOXB5P09067 269 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 UBE2MP61081 183 aaKnown RBP11.54□□□□□ -0.56
SIK3-211ENST00000485363 LYZP61626 148 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 TRGV9Q99603 122 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 MAGT1Q9H0U3 335 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 HRH4Q9H3N8 390 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 CLEC5AQ9NY25 188 aa11.54□□□□□ -0.56
SIK3-211ENST00000485363 NAP1L6A6NFF2 107 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 WRBO00258 174 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 NKX2-1P43699 371 aaPredicted RBP11.53□□□□□ -0.56
SIK3-211ENST00000485363 C1orf194Q5T5A4 169 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 GGNBP1Q5YKI7 109 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 TRIQKQ629K1 86 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 CSNK1G2-AS1Q8NCQ2 148 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 C2CD4CQ8TF44 421 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 C1QTNF4Q9BXJ3 329 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 TBC1D24Q9ULP9 559 aa11.53□□□□□ -0.56
SIK3-211ENST00000485363 H3BMM0 161 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 NDUFB6O95139 128 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
SIK3-211ENST00000485363 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 OR2F1Q13607 317 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
SIK3-211ENST00000485363 LGALS9CQ6DKI2 356 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 THAP8Q8NA92 274 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 PPP1R14BQ96C90 147 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 X6R8D5 127 aa11.52□□□□□ -0.57
SIK3-211ENST00000485363 IGKV1OR2-108A0A075B7D4 117 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 C9orf170A2RU37 121 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 C11orf94C9JXX5 98 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 CFDP00746 253 aaPredicted RBP11.51□□□□□ -0.57
SIK3-211ENST00000485363 HLA-DRB4P13762 266 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 ID1P41134 155 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 TCTAP57738 103 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 BAK1Q16611 211 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 HLA-DRB4X5D2U9 266 aa11.51□□□□□ -0.57
SIK3-211ENST00000485363 PRSS46E5RG02 174 aa11.5□□□□□ -0.57
SIK3-211ENST00000485363 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
SIK3-211ENST00000485363 OR8I2Q8N0Y5 310 aa11.5□□□□□ -0.57
SIK3-211ENST00000485363 COQ8AQ8NI60 647 aa11.5□□□□□ -0.57
SIK3-211ENST00000485363 LINC00052Q96N35 136 aa11.5□□□□□ -0.57
SIK3-211ENST00000485363 WDR12Q9GZL7 423 aaKnown RBP11.5□□□□□ -0.57
SIK3-211ENST00000485363 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
SIK3-211ENST00000485363 STRAPQ9Y3F4 350 aaKnown RBP11.5□□□□□ -0.57
SIK3-211ENST00000485363 KMT2AQ03164 3969 aa11.5□□□□□ -0.57
SIK3-211ENST00000485363 CENPXA8MT69 81 aa11.49□□□□□ -0.57
SIK3-211ENST00000485363 H3BP45 60 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms