RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.89
HDAC6-227ENST00000485102 IGLL5B9A064 214 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 GNG7O60262 68 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 MT-CO2P00403 227 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 GIG44P09565 113 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-227ENST00000485102 TOMM20LQ6UXN7 152 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 GSG1LQ6UXU4 331 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 LILRB2Q8N423 598 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 GBGT1Q8N5D6 347 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 GPR146Q96CH1 333 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 MS4A6AQ9H2W1 248 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 CACNG5Q9UF02 275 aa9.46□□□□□ -0.9
HDAC6-227ENST00000485102 IGKV3-7A0A075B6H7 116 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 ZNF705EA8MWA4 302 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-227ENST00000485102 WRBO00258 174 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 DEFB4AO15263 64 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 SSNA1O43805 119 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 HOXB5P09067 269 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 MIFP14174 115 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 HTR2BP41595 481 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 NPBWR1P48145 328 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 DEFB131AP59861 70 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 GGNBP1Q5YKI7 109 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 PVRIGQ6DKI7 326 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 LYZL2Q7Z4W2 148 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 LHFPL5Q8TAF8 219 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 ST8SIA2Q92186 375 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 MISP3Q96FF7 219 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 U3KQ87 197 aa9.45□□□□□ -0.9
HDAC6-227ENST00000485102 IGHV3OR16-13A0A075B7E8 117 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 IGHV3-74A0A0B4J1X5 117 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 A0A0B4J293 547 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 DNASE2O00115 360 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-227ENST00000485102 ST8SIA3O43173 380 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 PET100P0DJ07 73 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
HDAC6-227ENST00000485102 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 SPP1P10451 314 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 PVALBP20472 110 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-227ENST00000485102 HOXA1P49639 335 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-227ENST00000485102 OXA1LQ15070 435 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 RBMY1FQ15415 496 aaKnown RBP9.44□□□□□ -0.9
HDAC6-227ENST00000485102 MORN3Q6PF18 240 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-227ENST00000485102 ZNF600Q6ZNG1 722 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 TRPT1Q86TN4 253 aaKnown RBP9.44□□□□□ -0.9
HDAC6-227ENST00000485102 STHQ8IWL8 128 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 RNF126Q9BV68 326 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 TMEM231Q9H6L2 316 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 HSPB7Q9UBY9 170 aa9.44□□□□□ -0.9
HDAC6-227ENST00000485102 DNAH11Q96DT5 4516 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 IGHV4-28A0A0C4DH34 117 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 A0A1W2PS18 150 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 C7orf66A4D0T2 115 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 C5orf51A6NDU8 294 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 CEBPZOSA8MTT3 80 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 TMEM50AO95807 157 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-227ENST00000485102 RLN2P04090 185 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 HLA-DMBP28068 263 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 NKX2-1P43699 371 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-227ENST00000485102 IAH1Q2TAA2 248 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-227ENST00000485102 LEMD1Q68G75 181 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 C2orf50Q96LR7 162 aa9.43□□□□□ -0.9
HDAC6-227ENST00000485102 HEYLQ9NQ87 328 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-227ENST00000485102 PUS1Q9Y606 427 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC6-227ENST00000485102 IGHV4-4A0A075B6R2 117 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 RPS10-NUDT3A0A1W2PQS6 291 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 K7EQG2 157 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 PITX3O75364 302 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 TAS2R30P59541 319 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 RAB11AP62491 216 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 FAM24BQ8N5W8 94 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 CSNK1G2-AS1Q8NCQ2 148 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 RAB40CQ96S21 281 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 SEC22CQ9BRL7 303 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 X6R8D5 127 aa9.42□□□□□ -0.9
HDAC6-227ENST00000485102 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
HDAC6-227ENST00000485102 FAM25EA8MYX2 175 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 SYNGR2O43760 224 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 IGHV3-48P01763 117 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 NPPCP23582 126 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 CRYBB3P26998 211 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 ID3Q02535 119 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 Q6ZTC4 211 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 RNASEH2CQ8TDP1 164 aaKnown RBP9.41□□□□□ -0.9
HDAC6-227ENST00000485102 DTD1Q8TEA8 209 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 PINX1Q96BK5 328 aaKnown RBP9.41□□□□□ -0.9
HDAC6-227ENST00000485102 NMES1Q9C002 83 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 MED28Q9H204 178 aa9.41□□□□□ -0.9
HDAC6-227ENST00000485102 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-227ENST00000485102 AMBPP02760 352 aa9.4□□□□□ -0.9
HDAC6-227ENST00000485102 RPL11P62913 178 aaKnown RBP9.4□□□□□ -0.9
HDAC6-227ENST00000485102 FGL1Q08830 312 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms