RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 RCL1Q9Y2P8 373 aaKnown RBP12.1□□□□□ -0.47
DDR1-246ENST00000485023 LSM5Q9Y4Y9 91 aaKnown RBP12.1□□□□□ -0.47
DDR1-246ENST00000485023 A0A1W2PS18 150 aa12.09□□□□□ -0.47
DDR1-246ENST00000485023 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
DDR1-246ENST00000485023 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
DDR1-246ENST00000485023 MBPP02686 304 aaPredicted RBP12.09□□□□□ -0.47
DDR1-246ENST00000485023 PAX9P55771 341 aa12.09□□□□□ -0.47
DDR1-246ENST00000485023 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
DDR1-246ENST00000485023 ZNF124Q15973 351 aa12.09□□□□□ -0.47
DDR1-246ENST00000485023 RABAC1Q9UI14 185 aa12.09□□□□□ -0.47
DDR1-246ENST00000485023 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
DDR1-246ENST00000485023 HNRNPCP07910 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
DDR1-246ENST00000485023 METTL15P1P0C7V9 234 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 DEFA1P59665 94 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 DEFA3P59666 94 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 LYZP61626 148 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 RRAS2P62070 204 aaPredicted RBP12.08□□□□□ -0.48
DDR1-246ENST00000485023 LINC00322Q6ZN03 302 aaPredicted RBP12.08□□□□□ -0.48
DDR1-246ENST00000485023 APRG1Q8IVJ8 170 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 STXBP6Q8NFX7 210 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 RNF125Q96EQ8 232 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 GRAMD2BQ96HH9 432 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 SPATA25Q9BR10 227 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 MS4A6AQ9H2W1 248 aa12.08□□□□□ -0.48
DDR1-246ENST00000485023 IGKV1OR2-108A0A075B7D4 117 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 IL5P05113 134 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 S100A10P60903 97 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 FAM24BQ8N5W8 94 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 RAB40CQ96S21 281 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
DDR1-246ENST00000485023 GPN1Q9HCN4 374 aaPredicted RBP12.07□□□□□ -0.48
DDR1-246ENST00000485023 LOC102724200A0A096LPH7 203 aaPredicted RBP12.06□□□□□ -0.48
DDR1-246ENST00000485023 INMT-MINDY4F8WBC2 141 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 K7EPK0 472 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 L7N2F9 121 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 FABP1P07148 127 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 VAMP2P63027 116 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 GSG1LQ6UXU4 331 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 THAP8Q8NA92 274 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 C2orf50Q96LR7 162 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 MAP6D1Q9H9H5 199 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 U3KQE9 123 aa12.06□□□□□ -0.48
DDR1-246ENST00000485023 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 PMS2P5A8MQ11 134 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 GOSR2O14653 212 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 SIX6O95475 246 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 CD5P06127 495 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 RPL35AP18077 110 aaKnown RBP12.05□□□□□ -0.48
DDR1-246ENST00000485023 GATA2P23769 480 aaPredicted RBP12.05□□□□□ -0.48
DDR1-246ENST00000485023 BCAP31P51572 246 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 TMEM14EPQ6UXP3 125 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 TRGV9Q99603 122 aa12.05□□□□□ -0.48
DDR1-246ENST00000485023 TSC22D2O75157 780 aa12.04□□□□□ -0.48
DDR1-246ENST00000485023 EIF2B2P49770 351 aaKnown RBP12.04□□□□□ -0.48
DDR1-246ENST00000485023 CAV2P51636 162 aa12.04□□□□□ -0.48
DDR1-246ENST00000485023 LEMD1Q68G75 181 aa12.04□□□□□ -0.48
DDR1-246ENST00000485023 C16orf54Q6UWD8 224 aa12.04□□□□□ -0.48
DDR1-246ENST00000485023 GLMPQ8WWB7 406 aa12.04□□□□□ -0.48
DDR1-246ENST00000485023 PPP1R14BQ96C90 147 aa12.04□□□□□ -0.48
DDR1-246ENST00000485023 SNRPGP15A8MWD9 76 aa12.03□□□□□ -0.48
DDR1-246ENST00000485023 TAS2R30P59541 319 aa12.03□□□□□ -0.48
DDR1-246ENST00000485023 DEFB131AP59861 70 aa12.03□□□□□ -0.48
DDR1-246ENST00000485023 ARL16Q0P5N6 197 aa12.03□□□□□ -0.48
DDR1-246ENST00000485023 RAB32Q13637 225 aa12.03□□□□□ -0.48
DDR1-246ENST00000485023 TMEM182Q6ZP80 229 aaPredicted RBP12.03□□□□□ -0.48
DDR1-246ENST00000485023 OR10P1Q8NGE3 313 aa12.03□□□□□ -0.48
DDR1-246ENST00000485023 MGAT4CQ9UBM8 478 aa12.03□□□□□ -0.48
DDR1-246ENST00000485023 HELTA6NFD8 242 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 BUB3O43684 328 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 PRAF2O60831 178 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 ZNF688P0C7X2 276 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 DLK1P80370 383 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 SIGLEC15Q6ZMC9 328 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 MARVELD1Q9BSK0 173 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 DOK5Q9P104 306 aa12.02□□□□□ -0.49
DDR1-246ENST00000485023 TENM3Q9P273 2699 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 FAM24AA6NFZ4 105 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 K7EQG2 157 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 CST7O76096 145 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 ORM2P19652 201 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 PVALBP20472 110 aaPredicted RBP12.01□□□□□ -0.49
DDR1-246ENST00000485023 CYP2G1PQ6ZSU1 146 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 TMEM144Q7Z5S9 345 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 STPG3Q8N7X2 389 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 BPIFCQ8NFQ6 507 aa12.01□□□□□ -0.49
DDR1-246ENST00000485023 TRAV2A0A0B4J234 112 aa12□□□□□ -0.49
DDR1-246ENST00000485023 SSNA1O43805 119 aa12□□□□□ -0.49
DDR1-246ENST00000485023 APOC4P55056 127 aa12□□□□□ -0.49
DDR1-246ENST00000485023 CMC4P56277 68 aaPredicted RBP12□□□□□ -0.49
DDR1-246ENST00000485023 SLC38A11Q08AI6 406 aa12□□□□□ -0.49
DDR1-246ENST00000485023 LRRC37A5PQ49AS3 106 aa12□□□□□ -0.49
DDR1-246ENST00000485023 TMEM217Q8N7C4 229 aa12□□□□□ -0.49
DDR1-246ENST00000485023 OR1B1Q8NGR6 318 aa12□□□□□ -0.49
DDR1-246ENST00000485023 DCANP1Q8TF63 244 aa12□□□□□ -0.49
DDR1-246ENST00000485023 C11orf1Q9H5F2 150 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms