RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TMEM230Q96A57 120 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 SLC25A21Q9BQT8 299 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 RTBDNQ9BSG5 229 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 SLIRPQ9GZT3 109 aaKnown RBP4.58□□□□□ -1.68
PTCD3-215ENST00000484203 MIXL1Q9H2W2 232 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 VSIRQ9H7M9 311 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 MCUBQ9NWR8 336 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 C11orf21Q9P2W6 132 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 SHPKQ9UHJ6 478 aa4.58□□□□□ -1.68
PTCD3-215ENST00000484203 LCE6AA0A183 80 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 A0A1B0GU03 582 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 MPTX1A8MV57 137 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 H3BMQ9 156 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 MED6O75586 246 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SLC25A6P12236 298 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 AKR1C4P17516 323 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 CRYBB3P26998 211 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 TNFSF8P32971 234 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 TNFRSF9Q07011 255 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SMCO1Q147U7 214 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 TMEM128Q5BJH2 165 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 NMSQ5H8A3 153 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SPANXN2Q5MJ10 180 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SAMD13Q5VXD3 122 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SELENOHQ8IZQ5 122 aaKnown RBP4.57□□□□□ -1.68
PTCD3-215ENST00000484203 TOMM5Q8N4H5 51 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SLC24A4Q8NFF2 622 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 OR1S2Q8NGQ3 325 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 CIB3Q96Q77 187 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-215ENST00000484203 RNF2Q99496 336 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SOSTQ9BQB4 213 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 OVOL2Q9BRP0 275 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 CSTL1Q9H114 145 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 SEPSECSQ9HD40 501 aaKnown RBP4.57□□□□□ -1.68
PTCD3-215ENST00000484203 CACNG5Q9UF02 275 aa4.57□□□□□ -1.68
PTCD3-215ENST00000484203 PUS1Q9Y606 427 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTCD3-215ENST00000484203 NUPR2A6NF83 97 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 CCDC160A6NGH7 325 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 FAM90A26D6RGX4 464 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 NUDT3O95989 172 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 CFDP00746 253 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-215ENST00000484203 IFNA10P01566 189 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 RD3LP0DJH9 198 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 NPY1RP25929 384 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 OR10J1P30954 320 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 GPX4P36969 197 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-215ENST00000484203 INPP1P49441 399 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 UBE2MP61081 183 aaKnown RBP4.56□□□□□ -1.68
PTCD3-215ENST00000484203 NUTF2P61970 127 aaKnown RBP4.56□□□□□ -1.68
PTCD3-215ENST00000484203 SNRPD3P62318 126 aaKnown RBP4.56□□□□□ -1.68
PTCD3-215ENST00000484203 TMEM187Q14656 261 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 IZUMO4Q1ZYL8 232 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 CNPY1Q3B7I2 92 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 PYDC2Q56P42 97 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 FAM90A2PQ658T7 463 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 ZFAND6Q6FIF0 208 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 TCF24Q7RTU0 167 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 CENPSQ8N2Z9 138 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 GPR146Q96CH1 333 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 RNF183Q96D59 192 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 MFFQ9GZY8 342 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 WFDC10AQ9H1F0 79 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 MAP6D1Q9H9H5 199 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 HSPB7Q9UBY9 170 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 KLK5Q9Y337 293 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-215ENST00000484203 TMED3Q9Y3Q3 217 aa4.56□□□□□ -1.68
PTCD3-215ENST00000484203 IGHV3OR16-8A0A075B7F1 116 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 NAP1L6A6NFF2 107 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 CENPXA8MT69 81 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 ZNF207O43670 478 aaKnown RBP4.55□□□□□ -1.68
PTCD3-215ENST00000484203 IGKV1-17P01599 117 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 IFNA4P05014 189 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 HNRNPCP07910 306 aaKnown RBP eCLIP4.55□□□□□ -1.68
PTCD3-215ENST00000484203 IGLC1P0CG04 106 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 SPP1P10451 314 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 EDN2P20800 178 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 RAB11AP62491 216 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 RAB32Q13637 225 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 KLF9Q13886 244 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-215ENST00000484203 SPINK9Q5DT21 86 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 C1orf194Q5T5A4 169 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 OR8G2PQ6IF36 304 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 FAAP20Q6NZ36 180 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 PRSS54Q6PEW0 395 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 MORN3Q6PF18 240 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-215ENST00000484203 S100A7AQ86SG5 101 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 LRTM2Q8N967 370 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 OR1S1Q8NH92 325 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 DTD1Q8TEA8 209 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 MS4A6AQ9H2W1 248 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 FNDC4Q9H6D8 234 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-215ENST00000484203 RETNQ9HD89 108 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 FBXL17Q9UF56 701 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 UBQLN2Q9UHD9 624 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 RABAC1Q9UI14 185 aa4.55□□□□□ -1.68
PTCD3-215ENST00000484203 A0A087WWL8 130 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 A0A0G2JRQ6 117 aa4.54□□□□□ -1.68
PTCD3-215ENST00000484203 CXorf65A6NEN9 183 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms