RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 IGHV4-28A0A0C4DH34 117 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 DUXBA0A1W2PPF3 345 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 ZNF705EA8MWA4 302 aaPredicted RBP6.85□□□□□ -1.31
NUP50-215ENST00000484186 FAM90A26D6RGX4 464 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 MIFP14174 115 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 C4BPBP20851 252 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 GPX4P36969 197 aaPredicted RBP6.85□□□□□ -1.31
NUP50-215ENST00000484186 AP3S2P59780 193 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 SNRPD3P62318 126 aaKnown RBP6.85□□□□□ -1.31
NUP50-215ENST00000484186 PYDC2Q56P42 97 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 TMEM128Q5BJH2 165 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 SIGLEC15Q6ZMC9 328 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 LINC00299Q6ZSB3 139 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 TOMM5Q8N4H5 51 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 CSNK1G2-AS1Q8NCQ2 148 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 OR51G1Q8NGK1 321 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 OR1S1Q8NH92 325 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 C2CD4CQ8TF44 421 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 DEDD2Q8WXF8 326 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 HRH4Q9H3N8 390 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 SEPSECSQ9HD40 501 aaKnown RBP6.85□□□□□ -1.31
NUP50-215ENST00000484186 NRN1Q9NPD7 142 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 AGRNO00468 2067 aa6.85□□□□□ -1.31
NUP50-215ENST00000484186 ZFP92A6NM28 416 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 C11orf94C9JXX5 98 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 PITX3O75364 302 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 RBMY1A1P0DJD3 496 aaKnown RBP6.84□□□□□ -1.31
NUP50-215ENST00000484186 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 TCTAP57738 103 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 NUTF2P61970 127 aaKnown RBP6.84□□□□□ -1.31
NUP50-215ENST00000484186 GAMTQ14353 236 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 RBMY1FQ15415 496 aaKnown RBP6.84□□□□□ -1.31
NUP50-215ENST00000484186 SPANXN2Q5MJ10 180 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 TMED4Q7Z7H5 227 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 CCDC190Q86UF4 302 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 RPP25LQ8N5L8 163 aaKnown RBP6.84□□□□□ -1.31
NUP50-215ENST00000484186 LRTM2Q8N967 370 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 TRIM63Q969Q1 353 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 RNF125Q96EQ8 232 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 SLC35E1Q96K37 410 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 PBDC1Q9BVG4 233 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 CLEC5AQ9NY25 188 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 PFDN2Q9UHV9 154 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 X6R8D5 127 aa6.84□□□□□ -1.31
NUP50-215ENST00000484186 IGKV1D-37A0A075B6S9 117 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 A6NHS1 94 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 H3BMM0 161 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 DEDDO75618 318 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 IAPPP10997 89 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 SLC25A6P12236 298 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 NUP62P37198 522 aaPredicted RBP6.83□□□□□ -1.32
NUP50-215ENST00000484186 NKX2-1P43699 371 aaPredicted RBP6.83□□□□□ -1.32
NUP50-215ENST00000484186 RAB11AP62491 216 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 ZNF90Q03938 601 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 OR8G2PQ6IF36 304 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 SLC25A21Q9BQT8 299 aaPredicted RBP6.83□□□□□ -1.32
NUP50-215ENST00000484186 C1QTNF4Q9BXJ3 329 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 BATF3Q9NR55 127 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 TBC1D24Q9ULP9 559 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 V9GYH0 126 aa6.83□□□□□ -1.32
NUP50-215ENST00000484186 ELOA3CA0A087WX78 387 aaPredicted RBP6.82□□□□□ -1.32
NUP50-215ENST00000484186 SNRPGP15A8MWD9 76 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 IGLL5B9A064 214 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 MED6O75586 246 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 SFT2D2O95562 160 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 FABP1P07148 127 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 VAMP1P23763 118 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 HLA-DMBP28068 263 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 ZNF79Q15937 498 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 C1orf194Q5T5A4 169 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 CENPSQ8N2Z9 138 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 TRGV9Q99603 122 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 APLNQ9ULZ1 77 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 TMED3Q9Y3Q3 217 aa6.82□□□□□ -1.32
NUP50-215ENST00000484186 TRAV10A0A0B4J240 114 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 HLA-DRB4P13762 266 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 ID1P41134 155 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 LYZP61626 148 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 RPP30P78346 268 aaKnown RBP6.81□□□□□ -1.32
NUP50-215ENST00000484186 PPP1R1AQ13522 171 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 OR2F1Q13607 317 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 THAP8Q8NA92 274 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 LINC00052Q96N35 136 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 CIB3Q96Q77 187 aaPredicted RBP6.81□□□□□ -1.32
NUP50-215ENST00000484186 XCL2Q9UBD3 114 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 PAIP2BQ9ULR5 123 aaKnown RBP6.81□□□□□ -1.32
NUP50-215ENST00000484186 HLA-DRB4X5D2U9 266 aa6.81□□□□□ -1.32
NUP50-215ENST00000484186 IGKV1OR2-108A0A075B7D4 117 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 WRBO00258 174 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 SYNGR2O43760 224 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 CFDP00746 253 aaPredicted RBP6.8□□□□□ -1.32
NUP50-215ENST00000484186 HOXB5P09067 269 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 GGNBP1Q5YKI7 109 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 Q6ZTC4 211 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 PPP1R14BQ96C90 147 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 WDR12Q9GZL7 423 aaKnown RBP6.8□□□□□ -1.32
NUP50-215ENST00000484186 SRRQ9GZT4 340 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 MAGT1Q9H0U3 335 aa6.8□□□□□ -1.32
NUP50-215ENST00000484186 SAV1Q9H4B6 383 aaPredicted RBP6.8□□□□□ -1.32
NUP50-215ENST00000484186 PRSS46E5RG02 174 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms