RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 PRR20EP86478 221 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 PRR20CP86479 221 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 PRR20DP86480 221 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 PRR20BP86481 221 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 PRR20AP86496 221 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 TMEM95Q3KNT9 176 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 CLLU1Q5K131 121 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 ZNF329Q86UD4 541 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 KLHDC1Q8N7A1 406 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 GATAD1Q8WUU5 269 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 ACTR3CQ9C0K3 210 aaPredicted RBP10.86□□□□□ -0.67
SMAD9-204ENST00000483941 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
SMAD9-204ENST00000483941 TOMM40O96008 361 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 HBE1P02100 147 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 LINC00869P0C866 280 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 ELLP55199 621 aaPredicted RBP10.85□□□□□ -0.67
SMAD9-204ENST00000483941 RHOBP62745 196 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 NDUFA5Q16718 116 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 MIC13Q5XKP0 118 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 OR5AU1Q8NGC0 362 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 OR51G1Q8NGK1 321 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 OR10G4Q8NGN3 311 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 OR10G9Q8NGN4 311 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 OR10G7Q8NGN6 311 aa10.85□□□□□ -0.67
SMAD9-204ENST00000483941 IGKV1D-37A0A075B6S9 117 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 OR2T8A6NH00 312 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 TGOLN2O43493 480 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 HYPMO75409 117 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 PLP1P60201 277 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 TIGITQ495A1 244 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 FAM74A1Q5RGS3 127 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 ZNF343Q6P1L6 599 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 ZNF600Q6ZNG1 722 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 MRPL32Q9BYC8 188 aaKnown RBP10.84□□□□□ -0.67
SMAD9-204ENST00000483941 DNAJC4Q9NNZ3 241 aa10.84□□□□□ -0.67
SMAD9-204ENST00000483941 MRPL36Q9P0J6 103 aaKnown RBP10.84□□□□□ -0.67
SMAD9-204ENST00000483941 CTXND1A0A1B0GTU2 59 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 CLPSL1A2RUU4 121 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 NUDT19A8MXV4 375 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 COX7A2P2O60397 106 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 OR2C1O95371 312 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 IGKV1-17P01599 117 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 CTSGP08311 255 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 H2AFB1P0C5Y9 115 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 GPR183P32249 361 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 TAS2R45P59539 299 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 ZNF90Q03938 601 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 CLEC19AQ6UXS0 136 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 ZNF491Q8N8L2 437 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 KLK15Q9H2R5 256 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 RPRMQ9NS64 109 aa10.83□□□□□ -0.68
SMAD9-204ENST00000483941 PEF1Q9UBV8 284 aaKnown RBP10.83□□□□□ -0.68
SMAD9-204ENST00000483941 BMPR1BO00238 502 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 GGCTO75223 188 aaKnown RBP10.82□□□□□ -0.68
SMAD9-204ENST00000483941 PSG1P11464 419 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 ARL3P36405 182 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 CDX1P47902 265 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-204ENST00000483941 CDC34P49427 236 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-204ENST00000483941 FOXL1Q12952 345 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 C10orf113Q5VZT2 155 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 MYOZ3Q8TDC0 251 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 GNB4Q9HAV0 340 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 RNF114Q9Y508 228 aa10.82□□□□□ -0.68
SMAD9-204ENST00000483941 TRAV1-1A0A0B4J248 108 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 SEC14L6B5MCN3 397 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 F8W735 103 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-204ENST00000483941 YIF1AO95070 293 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 IGHV3-23P01764 117 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 RPLP1P05386 114 aaKnown RBP10.81□□□□□ -0.68
SMAD9-204ENST00000483941 NMBP08949 121 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 PPT1P50897 306 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 STXBP6Q8NFX7 210 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 RNF125Q96EQ8 232 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 HIGD1AQ9Y241 93 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 S4R3C0 116 aa10.81□□□□□ -0.68
SMAD9-204ENST00000483941 NDUFA4O00483 81 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 IL4P05112 153 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 LGALS1P09382 135 aaKnown RBP10.8□□□□□ -0.68
SMAD9-204ENST00000483941 OR5G3P0C626 314 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 ORM2P19652 201 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 LYZP61626 148 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 FAM106AQ4KMX7 169 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 FAM78BQ5VT40 261 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 FAM122CQ6P4D5 195 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 RPP25LQ8N5L8 163 aaKnown RBP10.8□□□□□ -0.68
SMAD9-204ENST00000483941 OR1B1Q8NGR6 318 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 SFT2D1Q8WV19 159 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 RCC1LQ96I51 464 aaKnown RBP10.8□□□□□ -0.68
SMAD9-204ENST00000483941 NARS2Q96I59 477 aaKnown RBP10.8□□□□□ -0.68
SMAD9-204ENST00000483941 TECRQ9NZ01 308 aaKnown RBP10.8□□□□□ -0.68
SMAD9-204ENST00000483941 FUT9Q9Y231 359 aa10.8□□□□□ -0.68
SMAD9-204ENST00000483941 WI2-2373I1.2A0A1W2PRP0 233 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 IGHV3-11P01762 117 aa10.79□□□□□ -0.68
SMAD9-204ENST00000483941 HSPB1P04792 205 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms