RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
ATG4B-221ENST00000483778 SCGB2A1O75556 95 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 ZNF90Q03938 601 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 C12orf74Q32Q52 190 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 ETFRF1Q6IPR1 90 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 SIGLEC15Q6ZMC9 328 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 DTD1Q8TEA8 209 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 WDR12Q9GZL7 423 aaKnown RBP12.97□□□□□ -0.33
ATG4B-221ENST00000483778 SLIRPQ9GZT3 109 aaKnown RBP12.97□□□□□ -0.33
ATG4B-221ENST00000483778 CCDC59Q9P031 241 aaKnown RBP12.97□□□□□ -0.33
ATG4B-221ENST00000483778 KCNIP3Q9Y2W7 256 aa12.97□□□□□ -0.33
ATG4B-221ENST00000483778 CCR6P51684 374 aa12.96□□□□□ -0.33
ATG4B-221ENST00000483778 AP2S1P53680 142 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-221ENST00000483778 FXYD7P58549 80 aa12.96□□□□□ -0.33
ATG4B-221ENST00000483778 KLF9Q13886 244 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-221ENST00000483778 GAMTQ14353 236 aa12.96□□□□□ -0.33
ATG4B-221ENST00000483778 LGI3Q8N145 548 aa12.96□□□□□ -0.33
ATG4B-221ENST00000483778 NRN1Q9NPD7 142 aa12.96□□□□□ -0.33
ATG4B-221ENST00000483778 MCUBQ9NWR8 336 aa12.96□□□□□ -0.33
ATG4B-221ENST00000483778 U3KQ87 197 aa12.96□□□□□ -0.33
ATG4B-221ENST00000483778 A0A0B4J2A0 478 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 EIF2B2P49770 351 aaKnown RBP12.95□□□□□ -0.34
ATG4B-221ENST00000483778 RAB2BQ8WUD1 216 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 RNF125Q96EQ8 232 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 SHPKQ9UHJ6 478 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
ATG4B-221ENST00000483778 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
ATG4B-221ENST00000483778 TMBIM6P55061 237 aa12.94□□□□□ -0.34
ATG4B-221ENST00000483778 TCTAP57738 103 aa12.94□□□□□ -0.34
ATG4B-221ENST00000483778 RSL24D1Q9UHA3 163 aaKnown RBP12.94□□□□□ -0.34
ATG4B-221ENST00000483778 TRAV10A0A0B4J240 114 aa12.93□□□□□ -0.34
ATG4B-221ENST00000483778 FABP12A6NFH5 140 aa12.93□□□□□ -0.34
ATG4B-221ENST00000483778 H3BMQ9 156 aa12.93□□□□□ -0.34
ATG4B-221ENST00000483778 PITX3O75364 302 aa12.93□□□□□ -0.34
ATG4B-221ENST00000483778 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
ATG4B-221ENST00000483778 OR2F1Q13607 317 aa12.93□□□□□ -0.34
ATG4B-221ENST00000483778 NOXA1Q86UR1 476 aa12.93□□□□□ -0.34
ATG4B-221ENST00000483778 IGKV1OR2-108A0A075B7D4 117 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 IAPPP10997 89 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 HLA-DRB4P13762 266 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 GPX4P36969 197 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-221ENST00000483778 OR1S1Q8NH92 325 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 LINC00052Q96N35 136 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 SEPSECSQ9HD40 501 aaKnown RBP12.92□□□□□ -0.34
ATG4B-221ENST00000483778 PLA2G2EQ9NZK7 142 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 RABL2AQ9UBK7 228 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-221ENST00000483778 RABL2BQ9UNT1 228 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 HLA-DRB4X5D2U9 266 aa12.92□□□□□ -0.34
ATG4B-221ENST00000483778 DEFB131BA0A096LNP1 70 aa12.91□□□□□ -0.34
ATG4B-221ENST00000483778 ZFP92A6NM28 416 aa12.91□□□□□ -0.34
ATG4B-221ENST00000483778 SOCS3O14543 225 aa12.91□□□□□ -0.34
ATG4B-221ENST00000483778 NKX2-1P43699 371 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-221ENST00000483778 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
ATG4B-221ENST00000483778 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
ATG4B-221ENST00000483778 C17orf77Q96MU5 243 aa12.91□□□□□ -0.34
ATG4B-221ENST00000483778 SCGB3A2Q96PL1 93 aa12.91□□□□□ -0.34
ATG4B-221ENST00000483778 F6UB75 175 aa12.9□□□□□ -0.34
ATG4B-221ENST00000483778 LYZP61626 148 aa12.9□□□□□ -0.34
ATG4B-221ENST00000483778 ZNF705AQ6ZN79 300 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-221ENST00000483778 MCFD2Q8NI22 146 aa12.9□□□□□ -0.34
ATG4B-221ENST00000483778 RNF126Q9BV68 326 aa12.9□□□□□ -0.34
ATG4B-221ENST00000483778 MAGT1Q9H0U3 335 aa12.9□□□□□ -0.34
ATG4B-221ENST00000483778 CACFD1Q9UGQ2 172 aa12.9□□□□□ -0.34
ATG4B-221ENST00000483778 HECTD4Q9Y4D8 3996 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 ZNF705FA8MVS1 300 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-221ENST00000483778 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-221ENST00000483778 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-221ENST00000483778 EMP1P54849 157 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 OR8G2PQ6IF36 304 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-221ENST00000483778 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 SLC35E1Q96K37 410 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 C20orf173Q96LM9 149 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 BCL7BQ9BQE9 202 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
ATG4B-221ENST00000483778 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-221ENST00000483778 IGHV3OR16-12A0A075B7B8 117 aa12.88□□□□□ -0.35
ATG4B-221ENST00000483778 NUTF2P61970 127 aaKnown RBP12.88□□□□□ -0.35
ATG4B-221ENST00000483778 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
ATG4B-221ENST00000483778 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
ATG4B-221ENST00000483778 SNRPGP15A8MWD9 76 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 PRSS46E5RG02 174 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 ANXA3P12429 323 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 GATA2P23769 480 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-221ENST00000483778 ATP5IP56385 69 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-221ENST00000483778 ZNF79Q15937 498 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 PYDC2Q56P42 97 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 TMEM128Q5BJH2 165 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 THAP8Q8NA92 274 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 OR4B1Q8NGF8 309 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 TRGV9Q99603 122 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 V9GYH0 126 aa12.87□□□□□ -0.35
ATG4B-221ENST00000483778 HERC2O95714 4834 aa12.86□□□□□ -0.35
ATG4B-221ENST00000483778 VAMP1P23763 118 aa12.86□□□□□ -0.35
ATG4B-221ENST00000483778 SRPXP78539 464 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms