RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 ZFP92A6NM28 416 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 DFFBO76075 338 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 P2RY1P47900 373 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 DEFA1P59665 94 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 DEFA3P59666 94 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 OR51G1Q8NGK1 321 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 NARS2Q96I59 477 aaKnown RBP13.39□□□□□ -0.27
HDAC6-225ENST00000483506 WWC2-AS2Q96NR7 200 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 RCHY1Q96PM5 261 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 CITED4Q96RK1 184 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
HDAC6-225ENST00000483506 IGHV3-66A0A0C4DH42 116 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 PRAF2O60831 178 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 SCGB1D2O95969 90 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 FABP1P07148 127 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-225ENST00000483506 PAFAH1B2P68402 229 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 ZNF90Q03938 601 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 IL15RAQ13261 267 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 OR8G2PQ6IF36 304 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 ACOT7LQ6ZUV0 252 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 RNF125Q96EQ8 232 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 GRAMD2BQ96HH9 432 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 MARVELD1Q9BSK0 173 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 MS4A6AQ9H2W1 248 aa13.38□□□□□ -0.27
HDAC6-225ENST00000483506 SNRPGP15A8MWD9 76 aa13.37□□□□□ -0.27
HDAC6-225ENST00000483506 C16orf54Q6UWD8 224 aa13.37□□□□□ -0.27
HDAC6-225ENST00000483506 GLMPQ8WWB7 406 aa13.37□□□□□ -0.27
HDAC6-225ENST00000483506 C2orf50Q96LR7 162 aa13.37□□□□□ -0.27
HDAC6-225ENST00000483506 C11orf1Q9H5F2 150 aa13.37□□□□□ -0.27
HDAC6-225ENST00000483506 GPN1Q9HCN4 374 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-225ENST00000483506 UBQLN2Q9UHD9 624 aa13.37□□□□□ -0.27
HDAC6-225ENST00000483506 RABAC1Q9UI14 185 aa13.37□□□□□ -0.27
HDAC6-225ENST00000483506 C7orf66A4D0T2 115 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 C5orf51A6NDU8 294 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 FAM25EA8MYX2 175 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 FNDC10F2Z333 226 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 INMT-MINDY4F8WBC2 141 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 BUB3O43684 328 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 NUP62P37198 522 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-225ENST00000483506 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 GGTLC1Q9BX51 225 aa13.36□□□□□ -0.27
HDAC6-225ENST00000483506 LOC102724200A0A096LPH7 203 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-225ENST00000483506 HELTA6NFD8 242 aa13.35□□□□□ -0.27
HDAC6-225ENST00000483506 K7EPK0 472 aa13.35□□□□□ -0.27
HDAC6-225ENST00000483506 CFDP00746 253 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-225ENST00000483506 EIF2B2P49770 351 aaKnown RBP13.35□□□□□ -0.27
HDAC6-225ENST00000483506 DLK1P80370 383 aa13.35□□□□□ -0.27
HDAC6-225ENST00000483506 GSG1LQ6UXU4 331 aa13.35□□□□□ -0.27
HDAC6-225ENST00000483506 GBGT1Q8N5D6 347 aa13.35□□□□□ -0.27
HDAC6-225ENST00000483506 MAP6D1Q9H9H5 199 aa13.35□□□□□ -0.27
HDAC6-225ENST00000483506 IGKV3-7A0A075B6H7 116 aa13.34□□□□□ -0.27
HDAC6-225ENST00000483506 K7EQG2 157 aa13.34□□□□□ -0.27
HDAC6-225ENST00000483506 CCNKO75909 580 aa13.34□□□□□ -0.27
HDAC6-225ENST00000483506 METTL15P1P0C7V9 234 aa13.34□□□□□ -0.27
HDAC6-225ENST00000483506 TFPI2P48307 235 aa13.34□□□□□ -0.27
HDAC6-225ENST00000483506 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
HDAC6-225ENST00000483506 DCANP1Q8TF63 244 aa13.34□□□□□ -0.27
HDAC6-225ENST00000483506 DNASE2O00115 360 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-225ENST00000483506 AP2S1P53680 142 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-225ENST00000483506 RPL11P62913 178 aaKnown RBP13.33□□□□□ -0.28
HDAC6-225ENST00000483506 OR10P1Q8NGE3 313 aa13.33□□□□□ -0.28
HDAC6-225ENST00000483506 GGACTQ9BVM4 153 aa13.33□□□□□ -0.28
HDAC6-225ENST00000483506 PFDN2Q9UHV9 154 aa13.33□□□□□ -0.28
HDAC6-225ENST00000483506 SLC45A2Q9UMX9 530 aa13.33□□□□□ -0.28
HDAC6-225ENST00000483506 LYZP61626 148 aa13.32□□□□□ -0.28
HDAC6-225ENST00000483506 OR2F1Q13607 317 aa13.32□□□□□ -0.28
HDAC6-225ENST00000483506 C1orf194Q5T5A4 169 aa13.32□□□□□ -0.28
HDAC6-225ENST00000483506 STPG3Q8N7X2 389 aa13.32□□□□□ -0.28
HDAC6-225ENST00000483506 STXBP6Q8NFX7 210 aa13.32□□□□□ -0.28
HDAC6-225ENST00000483506 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
HDAC6-225ENST00000483506 LSM5Q9Y4Y9 91 aaKnown RBP13.32□□□□□ -0.28
HDAC6-225ENST00000483506 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 L7N2F9 121 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 DEDDO75618 318 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 VAMP2P63027 116 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 ARL16Q0P5N6 197 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 SIGLEC15Q6ZMC9 328 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 APRG1Q8IVJ8 170 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 KIR2DL5AQ8N109 375 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 FAM24BQ8N5W8 94 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 BPIFCQ8NFQ6 507 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 KIR2DL5BQ8NHK3 375 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 NPVFQ9HCQ7 196 aa13.31□□□□□ -0.28
HDAC6-225ENST00000483506 SEPSECSQ9HD40 501 aaKnown RBP13.31□□□□□ -0.28
HDAC6-225ENST00000483506 PVALBP20472 110 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-225ENST00000483506 APOC4P55056 127 aa13.3□□□□□ -0.28
HDAC6-225ENST00000483506 RRAS2P62070 204 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-225ENST00000483506 RAB32Q13637 225 aa13.3□□□□□ -0.28
HDAC6-225ENST00000483506 TMEM182Q6ZP80 229 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-225ENST00000483506 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
HDAC6-225ENST00000483506 RETNQ9HD89 108 aa13.3□□□□□ -0.28
HDAC6-225ENST00000483506 LYRM2Q9NU23 88 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-225ENST00000483506 MGAT4CQ9UBM8 478 aa13.3□□□□□ -0.28
HDAC6-225ENST00000483506 SMCO3A2RU48 225 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 UBE2CO00762 179 aa13.29□□□□□ -0.28
HDAC6-225ENST00000483506 DEFB131AP59861 70 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms