RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CCL21O00585 134 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 SMIM6P0DI80 62 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 SAA1P0DJI8 122 aaPredicted RBP6.17□□□□□ -1.42
SNX13-208ENST00000482558 IGHV1-8P0DP01 117 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 LOXP28300 417 aaPredicted RBP6.17□□□□□ -1.42
SNX13-208ENST00000482558 AKR1C3P42330 323 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 AKR1D1P51857 326 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 DLX6P56179 175 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 LINC00205P59089 165 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 PLP1P60201 277 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 LCN2P80188 198 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 RPL19P84098 196 aaKnown RBP6.17□□□□□ -1.42
SNX13-208ENST00000482558 ZNF672Q499Z4 452 aaPredicted RBP6.17□□□□□ -1.42
SNX13-208ENST00000482558 SPINK9Q5DT21 86 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 Q6YL49 198 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 SPNS3Q6ZMD2 512 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 SSX7Q7RTT5 188 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 Q8N7P7 452 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 C8orf46Q8TAG6 207 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 GATAD1Q8WUU5 269 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 C22orf15Q8WYQ4 148 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 LEAP2Q969E1 77 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 ISOC2Q96AB3 205 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 FAM210BQ96KR6 192 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 PFDN5Q99471 154 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 NABP2Q9BQ15 211 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 TMEM133Q9H2Q1 129 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 PARLQ9H300 379 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 TECRQ9NZ01 308 aaKnown RBP6.17□□□□□ -1.42
SNX13-208ENST00000482558 PRRC2CQ9Y520 2896 aaKnown RBP6.17□□□□□ -1.42
SNX13-208ENST00000482558 ZGRF1Q86YA3 2104 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 PIEZO1Q92508 2521 aa6.17□□□□□ -1.42
SNX13-208ENST00000482558 APC2O95996 2303 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 PTPRZ1P23471 2315 aaPredicted RBP6.16□□□□□ -1.42
SNX13-208ENST00000482558 TRAV9-1A0A075B6T8 112 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 MMP23AO75900 390 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 YIF1AO95070 293 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 IGHV3-7P01780 117 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 IGHV2-5P01817 119 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 IGKV1-16P04430 117 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 CX3CL1P78423 397 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 PAX2Q02962 417 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 ADIRFQ15847 76 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 DUX4L9Q6RFH8 374 aaPredicted RBP6.16□□□□□ -1.42
SNX13-208ENST00000482558 ZNF114Q8NC26 417 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 OR8B3Q8NGG8 313 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 OR4P4Q8NGL7 312 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 OR8B2Q96RD0 313 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 HINT2Q9BX68 163 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 CLEC7AQ9BXN2 247 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 MRPL20Q9BYC9 149 aaKnown RBP6.16□□□□□ -1.42
SNX13-208ENST00000482558 FUT9Q9Y231 359 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
SNX13-208ENST00000482558 MAP1BP46821 2468 aaKnown RBP6.16□□□□□ -1.42
SNX13-208ENST00000482558 FBLL1A6NHQ2 334 aaKnown RBP6.15□□□□□ -1.42
SNX13-208ENST00000482558 SRRM4A7MD48 611 aaKnown RBP6.15□□□□□ -1.42
SNX13-208ENST00000482558 C9JCJ5 164 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 RNASE2P10153 161 aaKnown RBP6.15□□□□□ -1.42
SNX13-208ENST00000482558 CCL3L1P16619 93 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 GCHFRP30047 84 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 CEACAM3P40198 252 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 UQCRFS1P47985 274 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 MEOX2P50222 304 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 RPL23P62829 140 aaKnown RBP6.15□□□□□ -1.42
SNX13-208ENST00000482558 KIAA0141Q14154 515 aaPredicted RBP6.15□□□□□ -1.42
SNX13-208ENST00000482558 VAMP3Q15836 100 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 MIC13Q5XKP0 118 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 COX8CQ7Z4L0 72 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 OR9G4Q8NGQ1 327 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 OR1L6Q8NGR2 347 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 Q8WTZ3 238 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 CBLN4Q9NTU7 201 aa6.15□□□□□ -1.42
SNX13-208ENST00000482558 RAI1Q7Z5J4 1906 aaPredicted RBP6.15□□□□□ -1.43
SNX13-208ENST00000482558 DOCK11Q5JSL3 2073 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 ANKRD11Q6UB99 2663 aaPredicted RBP6.14□□□□□ -1.43
SNX13-208ENST00000482558 A0A1W2PRE2 83 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 ZNF98A6NK75 572 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 PPP5D1E7EU14 171 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 M0R1W7 72 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 IGLV1-47P01700 117 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 TYMSP04818 313 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 OR5G3P0C626 314 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 ARL14EPLP0DKL9 152 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 GALR1P47211 349 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 FABP9Q0Z7S8 132 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 PRR30Q53SZ7 412 aaPredicted RBP6.14□□□□□ -1.43
SNX13-208ENST00000482558 DNLZQ5SXM8 178 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 PVRIGQ6DKI7 326 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 LYPD2Q6UXB3 125 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 SLC16A13Q7RTY0 426 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 S100A7AQ86SG5 101 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 ZFP82Q8N141 532 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 OR51G1Q8NGK1 321 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 OR5R1Q8NH85 324 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 LINC00476Q8WZB0 136 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 PATZ1Q9HBE1 687 aaKnown RBP6.14□□□□□ -1.43
SNX13-208ENST00000482558 CTSZQ9UBR2 303 aa6.14□□□□□ -1.43
SNX13-208ENST00000482558 INSIG2Q9Y5U4 225 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms