RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR10J4P0C629 311 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 TPTE2P1Q5T6R2 138 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 MMD2Q8IY49 270 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 TMEM256Q8N2U0 113 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 OR4A5Q8NH83 315 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
CHD3-211ENST00000481999 CSPG4Q6UVK1 2322 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 A0A1W2PN81 502 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 C8orf88P0DMB2 117 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 CBLN1P23435 193 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 SRSF1Q07955 248 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD3-211ENST00000481999 MMDQ15546 238 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 PPP1R27Q86WC6 154 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 RNF2Q99496 336 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 SLC25A33Q9BSK2 321 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 GSX1Q9H4S2 264 aaPredicted RBP11.51□□□□□ -0.57
CHD3-211ENST00000481999 V9GYV3 84 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 A0A1W2PRE2 83 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 A1L4Q6 167 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 CRYGBP07316 175 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
CHD3-211ENST00000481999 HES1Q14469 280 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 PLGLAQ15195 96 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 TIGITQ495A1 244 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 OR11H6Q8NGC7 330 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
CHD3-211ENST00000481999 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 GGTLC3B5MD39 225 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 OVOL3O00110 214 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 RBP4P02753 201 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 HOXB4P17483 251 aaPredicted RBP11.5□□□□□ -0.57
CHD3-211ENST00000481999 PRTN3P24158 256 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 LGALS7P47929 136 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 LMO4P61968 165 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 CFHR4Q92496 578 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 NPIPB3Q92617 1050 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 MRPL18Q9H0U6 180 aaKnown RBP11.5□□□□□ -0.57
CHD3-211ENST00000481999 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 PAX2Q02962 417 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
CHD3-211ENST00000481999 A0A1B0GUS0 222 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 ODF3BA8MYP8 253 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 MOSP00540 346 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 OR5I1Q13606 314 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 MS4A10Q96PG2 267 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 SCGB1D1O95968 90 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 CRISP2P16562 243 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
CHD3-211ENST00000481999 COMPP49747 757 aaPredicted RBP11.49□□□□□ -0.57
CHD3-211ENST00000481999 RAB4BP61018 213 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 SUMO1P63165 101 aaKnown RBP11.49□□□□□ -0.57
CHD3-211ENST00000481999 NDUFAF3Q9BU61 184 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 DNAJC4Q9NNZ3 241 aa11.49□□□□□ -0.57
CHD3-211ENST00000481999 GCN1Q92616 2671 aaKnown RBP11.49□□□□□ -0.57
CHD3-211ENST00000481999 GRIFINA4D1Z8 144 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 NUPR1O60356 82 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 IER3P46695 156 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 SUB1P53999 127 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD3-211ENST00000481999 LBHQ53QV2 105 aaPredicted RBP11.48□□□□□ -0.57
CHD3-211ENST00000481999 SRSF12Q8WXF0 261 aaKnown RBP11.48□□□□□ -0.57
CHD3-211ENST00000481999 GNB1LQ9BYB4 327 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 AMMECR1Q9Y4X0 333 aaPredicted RBP11.48□□□□□ -0.57
CHD3-211ENST00000481999 S4R3C0 116 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 M0R1W7 72 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 ISLRO14498 428 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 ESDP10768 282 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 UBE2L3P68036 154 aaKnown RBP11.48□□□□□ -0.57
CHD3-211ENST00000481999 PAFAH1B2P68402 229 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
CHD3-211ENST00000481999 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 TEX45Q8NA69 505 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 FAM167A-AS1Q96KT0 104 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 CCL19Q99731 98 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 SIRPDQ9H106 197 aa11.48□□□□□ -0.57
CHD3-211ENST00000481999 IGKV1D-37A0A075B6S9 117 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 TRAV5A0A0B4J249 113 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 MT-ND6P03923 174 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 TPPP2P59282 170 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 TBX15Q96SF7 602 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 SLC25A2Q9BXI2 301 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 NAGKQ9UJ70 344 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 SNURFLB1AK76 121 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 COX7A2P2O60397 106 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 RANP62826 216 aaKnown RBP11.47□□□□□ -0.57
CHD3-211ENST00000481999 CX3CL1P78423 397 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 COX19Q49B96 90 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 WDR73Q6P4I2 378 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
CHD3-211ENST00000481999 TOX4O94842 621 aa11.46□□□□□ -0.57
CHD3-211ENST00000481999 FAM120AOSQ5T036 256 aa11.46□□□□□ -0.57
CHD3-211ENST00000481999 OR5AU1Q8NGC0 362 aa11.46□□□□□ -0.57
CHD3-211ENST00000481999 PERPQ96FX8 193 aa11.46□□□□□ -0.57
CHD3-211ENST00000481999 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms