RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ZNF680Q8NEM1 530 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 GINS3Q9BRX5 216 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 GPR61Q9BZJ8 451 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 ARV1Q9H2C2 271 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 TIMM9Q9Y5J7 89 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 SMCO3A2RU48 225 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 IGHV3-48P01763 117 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 MBP02144 154 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 CLEC3BP05452 202 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 FABP1P07148 127 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 GPR183P32249 361 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 OPRK1P41145 380 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 CD69Q07108 199 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 TEPPQ6URK8 271 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 TMEM144Q7Z5S9 345 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 OR9G4Q8NGQ1 327 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 EEF1AKMT3Q96AZ1 226 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 PSMG3Q9BT73 122 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-213ENST00000481019 SLC25A32Q9H2D1 315 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 GAR1Q9NY12 217 aaKnown RBP9.3□□□□□ -0.92
PTPRF-213ENST00000481019 SELENOKQ9Y6D0 94 aa9.3□□□□□ -0.92
PTPRF-213ENST00000481019 IGHV3-35A0A0C4DH35 117 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 I3L2K1 104 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 ARL3P36405 182 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 AKR1C1Q04828 323 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 ARL16Q0P5N6 197 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 FAM209BQ5JX69 171 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 REC114Q7Z4M0 266 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 WDR61Q9GZS3 305 aaKnown RBP9.29□□□□□ -0.92
PTPRF-213ENST00000481019 WDR83OSQ9Y284 106 aa9.29□□□□□ -0.92
PTPRF-213ENST00000481019 TRAV30A0A087WSZ9 112 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 TRBV7-1A0A0A6YYK4 115 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 IZUMO1RA6ND01 250 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 OR2T8A6NH00 312 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 PRSS46E5RG02 174 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 GGCTO75223 188 aaKnown RBP9.28□□□□□ -0.92
PTPRF-213ENST00000481019 IGLV1-51P01701 117 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 SPP1P10451 314 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 FGF7P21781 194 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 ADMP35318 185 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 NPBWR1P48145 328 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 INSL3P51460 131 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 SELENOTP62341 195 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 BTNL8Q6UX41 500 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 UNQ9165/PRO28630Q6UXU0 137 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 HSD17B11Q8NBQ5 300 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 OR2G3Q8NGZ4 309 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 VN1R17PQ8TDU5 208 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 TMEM170AQ8WVE7 144 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 MISP3Q96FF7 219 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 CXorf58Q96LI9 332 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 ATP6V0BQ99437 205 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 TXN2Q99757 166 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 WFDC1Q9HC57 220 aa9.28□□□□□ -0.92
PTPRF-213ENST00000481019 MRPL36Q9P0J6 103 aaKnown RBP9.28□□□□□ -0.92
PTPRF-213ENST00000481019 SORL1Q92673 2214 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 UBE2L5PA0A1B0GUS4 154 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 TEX46H3BTG2 121 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 MT-CO2P00403 227 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 CFDP00746 253 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-213ENST00000481019 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 BLOC1S1P78537 153 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 IFITM2Q01629 132 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 MLANAQ16655 118 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 NDUFA5Q16718 116 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 AKR1C8PQ5T2L2 129 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 DPPA3Q6W0C5 159 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 SLC16A13Q7RTY0 426 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 S100A7AQ86SG5 101 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 SAT2Q96F10 170 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-213ENST00000481019 BSCL2Q96G97 398 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-213ENST00000481019 ELOVL1Q9BW60 279 aa9.27□□□□□ -0.93
PTPRF-213ENST00000481019 ZNF256Q9Y2P7 627 aaPredicted RBP9.27□□□□□ -0.93
PTPRF-213ENST00000481019 LSM4Q9Y4Z0 139 aaKnown RBP9.27□□□□□ -0.93
PTPRF-213ENST00000481019 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 TGOLN2O43493 480 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 S100A7P31151 101 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 CAMLGP49069 296 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 MFAP4P55083 255 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 RAB2AP61019 212 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 GAMTQ14353 236 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 TM4SF20Q53R12 229 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 DEFB121Q5J5C9 76 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 ALKAL2Q6UX46 152 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 Q6ZRG5 221 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 GPHB5Q86YW7 130 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 OR4X1Q8NH49 305 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 FNDC4Q9H6D8 234 aaPredicted RBP9.26□□□□□ -0.93
PTPRF-213ENST00000481019 C21orf62Q9NYP8 219 aa9.26□□□□□ -0.93
PTPRF-213ENST00000481019 IGHV3OR16-8A0A075B7F1 116 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 TMEM213A2RRL7 107 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 ZFP92A6NM28 416 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 LGALS9O00182 355 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 CTSGP08311 255 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 RPL29P47914 159 aaKnown RBP9.25□□□□□ -0.93
PTPRF-213ENST00000481019 SULT1A2P50226 295 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 ACOT6Q3I5F7 207 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms