RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 CACNG5Q9UF02 275 aa6.57□□□□□ -1.36
GTF3C2-210ENST00000480989 FAT1Q14517 4588 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 IGHV3OR16-12A0A075B7B8 117 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 TRAV30A0A087WSZ9 112 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 TOMM40O96008 361 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 SPART-AS1P0CW21 52 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 HTR2BP41595 481 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 NKX2-1P43699 371 aaPredicted RBP6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 ZNF79Q15937 498 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 RNASE10Q5GAN6 216 aaKnown RBP6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 NMSQ5H8A3 153 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 TMEM88Q6PEY1 159 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 ARRDC1Q8N5I2 433 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 SLC24A4Q8NFF2 622 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 OR52E5Q8NH55 327 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 Q8WTZ3 238 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 PDCD10Q9BUL8 212 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 FUNDC2Q9BWH2 189 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 C1QTNF4Q9BXJ3 329 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 TMEM222Q9H0R3 208 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 MTFP1Q9UDX5 166 aa6.56□□□□□ -1.36
GTF3C2-210ENST00000480989 A8MTW9 85 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 IFNA10P01566 189 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 SLC25A4P12235 298 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 ZNF90Q03938 601 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 AMTNQ6UX39 209 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 TERB2Q8NHR7 220 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 RNASEH2CQ8TDP1 164 aaKnown RBP6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 RNF125Q96EQ8 232 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 ACY3Q96HD9 319 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 NARS2Q96I59 477 aaKnown RBP6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 NIPSNAP3BQ9BS92 247 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 MIXL1Q9H2W2 232 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 Q9H521 79 aa6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 YTHDF2Q9Y5A9 579 aaKnown RBP6.55□□□□□ -1.36
GTF3C2-210ENST00000480989 IGKV1OR2-108A0A075B7D4 117 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 RPS10-NUDT3A0A1W2PQS6 291 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 PLAC8L1A1L4L8 177 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 SMIM9A6NGZ8 99 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 RD3LP0DJH9 198 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 HTN3P15516 51 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 NPY1RP25929 384 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 AP2S1P53680 142 aaPredicted RBP6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 RNF212Q495C1 297 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 FOXI2Q6ZQN5 318 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 FAM219AQ8IW50 185 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 RBPMSQ93062 196 aaKnown RBP6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 CLUHP3Q96NS8 147 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 NAA60Q9H7X0 242 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 ENY2Q9NPA8 101 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 HEYLQ9NQ87 328 aaPredicted RBP6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 COPZ2Q9P299 210 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 RFNGQ9Y644 331 aa6.54□□□□□ -1.36
GTF3C2-210ENST00000480989 A0A0J9YX75 114 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 TEX13DA0A0J9YY54 714 aaPredicted RBP6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 SMIM31A0A1B0GVY4 71 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 TMEM189A5PLL7 270 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 CEBPZOSA8MTT3 80 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 CRXO43186 299 aaPredicted RBP6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 EIF2B2P49770 351 aaKnown RBP6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 RORCP51449 518 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 PAX9P55771 341 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 NUTF2P61970 127 aaKnown RBP6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 OXA1LQ15070 435 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 CTF1Q16619 201 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 SCGB2B2Q4G0G5 96 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 FAM78BQ5VT40 261 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 TMEM268Q5VZI3 342 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 CCDC71LQ8N9Z2 235 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 TMEM229BQ8NBD8 167 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 ZNRF2Q8NHG8 242 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 RNASE11Q8TAA1 199 aaKnown RBP6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 FAM210BQ96KR6 192 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 LINC00052Q96N35 136 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 EXTL2Q9UBQ6 330 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 GPR132Q9UNW8 380 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 TMEM56-RWDD3S4R434 201 aa6.53□□□□□ -1.36
GTF3C2-210ENST00000480989 CRYM-AS1A6NIL9 109 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 FAM25AB3EWG3 89 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 FAM25CB3EWG5 89 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 FAM25GB3EWG6 89 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 CDK2AP2O75956 126 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 ATG12O94817 140 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 RAB3DO95716 219 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 IFNA21P01568 189 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 TBPP20226 339 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 PSMB3P49720 205 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 SUPT4H1P63272 117 aaKnown RBP6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 GAMTQ14353 236 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 STEAP1BQ6NZ63 245 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 TMEM182Q6ZP80 229 aaPredicted RBP6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 CENPSQ8N2Z9 138 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 OR4B1Q8NGF8 309 aa6.52□□□□□ -1.37
GTF3C2-210ENST00000480989 OR4C16Q8NGL9 310 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms