RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 SIX6O95475 246 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 CA1P00915 261 aaPredicted RBP7.58□□□□□ -1.2
SMURF1-204ENST00000480055 PPYP01298 95 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 FCER2P06734 321 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 CBX5P45973 191 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 PAFAH1B2P68402 229 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 UQCC3Q6UW78 93 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 ACOT7LQ6ZUV0 252 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 ZNF546Q86UE3 836 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 HOGA1Q86XE5 327 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 GBGT1Q8N5D6 347 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 TMEM116Q8NCL8 245 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 STOML3Q8TAV4 291 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 LINC00052Q96N35 136 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 NMES1Q9C002 83 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 SMPXQ9UHP9 88 aa7.58□□□□□ -1.2
SMURF1-204ENST00000480055 IGHV7-4-1A0A0J9YVY3 117 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 MEIS3P1A6NDR6 274 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 C15orf62A8K5M9 175 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 M0QYG6 137 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 NUPL2O15504 423 aaKnown RBP7.57□□□□□ -1.2
SMURF1-204ENST00000480055 CYCSP99999 105 aaKnown RBP7.57□□□□□ -1.2
SMURF1-204ENST00000480055 RELQ04864 619 aaPredicted RBP7.57□□□□□ -1.2
SMURF1-204ENST00000480055 WT1-ASQ06250 92 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 MSMO1Q15800 293 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 ALKAL2Q6UX46 152 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 TMEM17Q86X19 198 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 GVQW1Q8N7I0 195 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 OR1L8Q8NGR8 309 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 LSM10Q969L4 123 aaKnown RBP7.57□□□□□ -1.2
SMURF1-204ENST00000480055 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
SMURF1-204ENST00000480055 PLEKHA2Q9HB19 425 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 COMMD9Q9P000 198 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 OR51B2Q9Y5P1 312 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 F11RQ9Y624 299 aaKnown RBP7.57□□□□□ -1.2
SMURF1-204ENST00000480055 DNAH11Q96DT5 4516 aa7.57□□□□□ -1.2
SMURF1-204ENST00000480055 IGHV3OR16-13A0A075B7E8 117 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 IGHV3-74A0A0B4J1X5 117 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 A0A1B0GVY2 172 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 KANTRA0A1W2PQU2 76 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 RAB19A4D1S5 217 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 DNASE2O00115 360 aaPredicted RBP7.56□□□□□ -1.2
SMURF1-204ENST00000480055 CHEK1O14757 476 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 RLN2P04090 185 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 MFAP2P55001 183 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 TCTAP57738 103 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 HERV-K104P61576 105 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 PPP1R1AQ13522 171 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 TMEM187Q14656 261 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 POU2AF1Q16633 256 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 KRTAP19-4Q3LI73 84 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 SMUG1Q53HV7 270 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 TEPPQ6URK8 271 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 ZNF818PQ6ZRF7 136 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 LINC00336Q6ZUF6 198 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 LHFPL1Q86WI0 220 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 COQ8AQ8NI60 647 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 CLUHP3Q96NS8 147 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 SCGB3A2Q96PL1 93 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 KRTAP4-12Q9BQ66 201 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 NSG2Q9Y328 171 aa7.56□□□□□ -1.2
SMURF1-204ENST00000480055 TEX13DA0A0J9YY54 714 aaPredicted RBP7.55□□□□□ -1.2
SMURF1-204ENST00000480055 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
SMURF1-204ENST00000480055 C11orf94C9JXX5 98 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 SCO1O75880 301 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 KRASP01116 189 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 PLA2G1BP04054 148 aaKnown RBP7.55□□□□□ -1.2
SMURF1-204ENST00000480055 CTSGP08311 255 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 SURF2Q15527 256 aaPredicted RBP7.55□□□□□ -1.2
SMURF1-204ENST00000480055 TMEM128Q5BJH2 165 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 TMED4Q7Z7H5 227 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 PPP1R1CQ8WVI7 109 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 PCNPQ8WW12 178 aaKnown RBP7.55□□□□□ -1.2
SMURF1-204ENST00000480055 TMEM56Q96MV1 263 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 ATP6V0BQ99437 205 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 IFT46Q9NQC8 304 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 NDUFA4L2Q9NRX3 87 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 GPR132Q9UNW8 380 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 PKD1P98161 4303 aa7.55□□□□□ -1.2
SMURF1-204ENST00000480055 KRTAP9-6A0A140TA67 174 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 TEX46H3BTG2 121 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 K7EIM0 57 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 HRH1P35367 487 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 G6PCP35575 357 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 LPAR6P43657 344 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 MFAP4P55083 255 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 C21orf62-AS1Q17RA5 79 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 LEMD1Q68G75 181 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 TCF24Q7RTU0 167 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 STHQ8IWL8 128 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 TERB2Q8NHR7 220 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 THAP6Q8TBB0 222 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 ARPC5LQ9BPX5 153 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 FKBP11Q9NYL4 201 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 PRNDQ9UKY0 176 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 APLNQ9ULZ1 77 aa7.54□□□□□ -1.2
SMURF1-204ENST00000480055 IGHV3-66A0A0C4DH42 116 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms