RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 LGI3Q8N145 548 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 CSNK1G2-AS1Q8NCQ2 148 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 DTD1Q8TEA8 209 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 IL22RA2Q969J5 263 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 RNF125Q96EQ8 232 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 RBKSQ9H477 322 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 XCL2Q9UBD3 114 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 HSPB7Q9UBY9 170 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 TMEM56-RWDD3S4R434 201 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 FAT2Q9NYQ8 4349 aa4.83□□□□□ -1.64
FN1-220ENST00000480024 DNAH2Q9P225 4427 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 RYR1P21817 5038 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 IGHV4-4A0A075B6R2 117 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 A0A0B4J2A0 478 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 ZFP92A6NM28 416 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 H3BMM0 161 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 BUB3O43684 328 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 NOL3O60936 208 aaKnown RBP4.82□□□□□ -1.64
FN1-220ENST00000480024 IGKV3-20P01619 116 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 PSG1P11464 419 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 CCR6P51684 374 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 TCTAP57738 103 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 DEFB1P60022 68 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 LYZP61626 148 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 NUTF2P61970 127 aaKnown RBP4.82□□□□□ -1.64
FN1-220ENST00000480024 SUPT4H1P63272 117 aaKnown RBP4.82□□□□□ -1.64
FN1-220ENST00000480024 SMCO1Q147U7 214 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 GSG1LQ6UXU4 331 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 TMED4Q7Z7H5 227 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 NOXA1Q86UR1 476 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 OR1S1Q8NH92 325 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 DYNC2LI1Q8TCX1 351 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 RAB2BQ8WUD1 216 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 CACFD1Q9UGQ2 172 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 RSL24D1Q9UHA3 163 aaKnown RBP4.82□□□□□ -1.64
FN1-220ENST00000480024 SHPKQ9UHJ6 478 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 SCP2D1Q9UJQ7 156 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 PAIP2BQ9ULR5 123 aaKnown RBP4.82□□□□□ -1.64
FN1-220ENST00000480024 KCNIP3Q9Y2W7 256 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 U3KQ87 197 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 DNAH17Q9UFH2 4485 aa4.82□□□□□ -1.64
FN1-220ENST00000480024 DYNC1H1Q14204 4646 aaKnown RBP4.81□□□□□ -1.64
FN1-220ENST00000480024 IGKV1D-37A0A075B6S9 117 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 IGHV3OR16-12A0A075B7B8 117 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 DEFB131BA0A096LNP1 70 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 AMBPP02760 352 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 IAPPP10997 89 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 ANXA3P12429 323 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 HLA-DRB4P13762 266 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 NUP62P37198 522 aaPredicted RBP4.81□□□□□ -1.64
FN1-220ENST00000480024 NKX2-1P43699 371 aaPredicted RBP4.81□□□□□ -1.64
FN1-220ENST00000480024 EMP1P54849 157 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 FXYD7P58549 80 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 SRPXP78539 464 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 ZNF90Q03938 601 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 OR2F1Q13607 317 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 KLF9Q13886 244 aaPredicted RBP4.81□□□□□ -1.64
FN1-220ENST00000480024 GAMTQ14353 236 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 C12orf74Q32Q52 190 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 GDF5OSQ5U4N7 250 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 OR8G2PQ6IF36 304 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 COQ8AQ8NI60 647 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 PPP1R14BQ96C90 147 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 SLC35E1Q96K37 410 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 LINC00052Q96N35 136 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 SCGB3A2Q96PL1 93 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 SCRT1Q9BWW7 348 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 WDR12Q9GZL7 423 aaKnown RBP4.81□□□□□ -1.64
FN1-220ENST00000480024 SLIRPQ9GZT3 109 aaKnown RBP4.81□□□□□ -1.64
FN1-220ENST00000480024 RABL2AQ9UBK7 228 aaPredicted RBP4.81□□□□□ -1.64
FN1-220ENST00000480024 RABL2BQ9UNT1 228 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 HLA-DRB4X5D2U9 266 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
FN1-220ENST00000480024 FABP12A6NFH5 140 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 H3BMQ9 156 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 FABP1P07148 127 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 VAMP1P23763 118 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 TNFSF8P32971 234 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 FAUP35544 74 aaKnown RBP4.8□□□□□ -1.64
FN1-220ENST00000480024 PSMB3P49720 205 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 TMBIM6P55061 237 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 MCFD2Q8NI22 146 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 BCL7BQ9BQE9 202 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 RNF126Q9BV68 326 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 SEPSECSQ9HD40 501 aaKnown RBP4.8□□□□□ -1.64
FN1-220ENST00000480024 PFDN2Q9UHV9 154 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 DNAH11Q96DT5 4516 aa4.8□□□□□ -1.64
FN1-220ENST00000480024 ZNF705FA8MVS1 300 aaPredicted RBP4.79□□□□□ -1.64
FN1-220ENST00000480024 F6UB75 175 aa4.79□□□□□ -1.64
FN1-220ENST00000480024 SOCS3O14543 225 aa4.79□□□□□ -1.64
FN1-220ENST00000480024 ZNF705DP0CH99 300 aaPredicted RBP4.79□□□□□ -1.64
FN1-220ENST00000480024 ZNF705BP0CI00 300 aaPredicted RBP4.79□□□□□ -1.64
FN1-220ENST00000480024 GPX4P36969 197 aaPredicted RBP4.79□□□□□ -1.64
FN1-220ENST00000480024 ID1P41134 155 aa4.79□□□□□ -1.64
FN1-220ENST00000480024 AP3S2P59780 193 aa4.79□□□□□ -1.64
FN1-220ENST00000480024 RAB11AP62491 216 aa4.79□□□□□ -1.64
FN1-220ENST00000480024 PYDC2Q56P42 97 aa4.79□□□□□ -1.64
FN1-220ENST00000480024 ZNF705AQ6ZN79 300 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms