RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	IL34	Q6ZMJ4	242 aa		11.68	□□□□□ -0.54
HDLBP-238	ENST00000479894	TMEM252	Q8N6L7	170 aa		11.68	□□□□□ -0.54
HDLBP-238	ENST00000479894	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.68	□□□□□ -0.54
HDLBP-238	ENST00000479894	OR2K2	Q8NGT1	345 aa		11.68	□□□□□ -0.54
HDLBP-238	ENST00000479894	TMEM170A	Q8WVE7	144 aa		11.68	□□□□□ -0.54
HDLBP-238	ENST00000479894	CCDC140	Q96MF4	163 aa		11.68	□□□□□ -0.54
HDLBP-238	ENST00000479894	IGHV3-21	A0A0B4J1V1	117 aa		11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	RND2	P52198	227 aa		11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	KLF5	Q13887	457 aa	Predicted RBP	11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	LILRB2	Q8N423	598 aa		11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	ACY3	Q96HD9	319 aa		11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	C11orf1	Q9H5F2	150 aa		11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	NPVF	Q9HCQ7	196 aa		11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	PFDN2	Q9UHV9	154 aa		11.67	□□□□□ -0.54
HDLBP-238	ENST00000479894	ABCA13	Q86UQ4	5058 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	FAM24A	A6NFZ4	105 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	ZFP92	A6NM28	416 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	LGALS9	O00182	355 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	BMPR1B	O00238	502 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	NDUFA4	O00483	81 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	IGHV3-23	P01764	117 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	CTSG	P08311	255 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	OR10J1	P30954	320 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	CD81	P60033	236 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	YPEL3	P61236	119 aa	Predicted RBP	11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	DEFA5	Q01523	94 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	AKR1C1	Q04828	323 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	SLC38A11	Q08AI6	406 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	GAMT	Q14353	236 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	ZNF600	Q6ZNG1	722 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	TMEM144	Q7Z5S9	345 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	S100A7A	Q86SG5	101 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894		Q8WTZ3	238 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	CHAC2	Q8WUX2	184 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	NPIPB3	Q92617	1050 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	RNF126	Q9BV68	326 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	MBD2	Q9UBB5	411 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	UFC1	Q9Y3C8	167 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894		S4R3C0	116 aa		11.66	□□□□□ -0.54
HDLBP-238	ENST00000479894	DFFB	O76075	338 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	RPL12	P30050	165 aa	Known RBP	11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	BMI1	P35226	326 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	ELL	P55199	621 aa	Predicted RBP	11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	SELENOT	P62341	195 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	ACOT7L	Q6ZUV0	252 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	WDR89	Q96FK6	387 aa	Predicted RBP	11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	NEURL2	Q9BR09	285 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	GINS3	Q9BRX5	216 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	UQCC1	Q9NVA1	299 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	OR5AC2	Q9NZP5	309 aa		11.65	□□□□□ -0.54
HDLBP-238	ENST00000479894	ZNF320	A2RRD8	509 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	SMCO3	A2RU48	225 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	PMS2P5	A8MQ11	134 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	PRSS46	E5RG02	174 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	PPP5D1	E7EU14	171 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894		H0YIZ8	118 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	MPDU1	O75352	247 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	CCNK	O75909	580 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	CST7	O76096	145 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	OR2C1	O95371	312 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	IGHV3-48	P01763	117 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	RD3L	P0DJH9	198 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	ATF4	P18848	351 aa	Predicted RBP	11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	MLANA	Q16655	118 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	TEPP	Q6URK8	271 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	ZNF546	Q86UE3	836 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	TMEM217	Q8N7C4	229 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	MARC2	Q969Z3	335 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	NARS2	Q96I59	477 aa	Known RBP	11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	TRGV9	Q99603	122 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	TMEM147	Q9BVK8	224 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	SRD5A3	Q9H8P0	318 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	VPS13D	Q5THJ4	4388 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	PKHD1	P08F94	4074 aa		11.64	□□□□□ -0.55
HDLBP-238	ENST00000479894	DNAH6	Q9C0G6	4158 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	IGSF23	A1L1A6	192 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	IZUMO1R	A6ND01	250 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894		K7EMT4	169 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	YIF1A	O95070	293 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	CSN3	P07498	182 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	IGLC1	P0CG04	106 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	AP2S1	P53680	142 aa	Predicted RBP	11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	AKAP14	Q86UN6	197 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	THAP8	Q8NA92	274 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	OVOL2	Q9BRP0	275 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894	KCNIP2	Q9NS61	270 aa		11.63	□□□□□ -0.55
HDLBP-238	ENST00000479894		F8W735	103 aa	Predicted RBP	11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	IFNA5	P01569	189 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	TRBV12-3	P01733	135 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	SYNJ2BP	P57105	145 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	WFDC3	Q8IUB2	231 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	DEFB125	Q8N687	156 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	AQP10	Q96PS8	301 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	CHRDL1	Q9BU40	450 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	DAZ1	Q9NQZ3	744 aa	Known RBP	11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	RNF24	Q9Y225	148 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	HSPB11	Q9Y547	144 aa		11.62	□□□□□ -0.55
HDLBP-238	ENST00000479894	hCG_2014768	A0A024R1R8	64 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms