RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 VCX3AQ9NNX9 186 aa8.54□□□□□ -1.04
GCA-208ENST00000479199 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.54□□□□□ -1.04
GCA-208ENST00000479199 DKK2Q9UBU2 259 aa8.54□□□□□ -1.04
GCA-208ENST00000479199 MTFP1Q9UDX5 166 aa8.54□□□□□ -1.04
GCA-208ENST00000479199 RFNGQ9Y644 331 aa8.54□□□□□ -1.04
GCA-208ENST00000479199 TMEM189A5PLL7 270 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 CDS2O95674 445 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 RD3LP0DJH9 198 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 PSG1P11464 419 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 SELENOHQ8IZQ5 122 aaKnown RBP8.53□□□□□ -1.04
GCA-208ENST00000479199 ZNF709Q8N972 641 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 TERB2Q8NHR7 220 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 GLYATL2Q8WU03 294 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 RBPMSQ93062 196 aaKnown RBP8.53□□□□□ -1.04
GCA-208ENST00000479199 GPR146Q96CH1 333 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 LINC00052Q96N35 136 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 NIPSNAP3BQ9BS92 247 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 SLC35B3Q9H1N7 401 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 SAV1Q9H4B6 383 aaPredicted RBP8.53□□□□□ -1.04
GCA-208ENST00000479199 EXTL2Q9UBQ6 330 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 HSPG2P98160 4391 aa8.53□□□□□ -1.04
GCA-208ENST00000479199 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 B3GALNT1O75752 331 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 TNFAIP8O95379 198 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 RAB3DO95716 219 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 NMSQ5H8A3 153 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 TMEM268Q5VZI3 342 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 ETFRF1Q6IPR1 90 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 FOXI2Q6ZQN5 318 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 RNF125Q96EQ8 232 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 FAM210BQ96KR6 192 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 ABHD1Q96SE0 405 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 NAA60Q9H7X0 242 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 PRR13Q9NZ81 148 aa8.52□□□□□ -1.05
GCA-208ENST00000479199 C14orf166Q9Y224 244 aaKnown RBP8.52□□□□□ -1.05
GCA-208ENST00000479199 A0A087WXM4 84 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 TEX13DA0A0J9YY54 714 aaPredicted RBP8.51□□□□□ -1.05
GCA-208ENST00000479199 TEX48A0A1B0GUV7 120 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 F6UB75 175 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 SOCS3O14543 225 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 RORCP51449 518 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 TAS2R19P59542 299 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 SOHLH1Q5JUK2 328 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 STEAP1BQ6NZ63 245 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 TMEM88Q6PEY1 159 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 TMEM229BQ8NBD8 167 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 OR4B1Q8NGF8 309 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 COQ8AQ8NI60 647 aa8.51□□□□□ -1.05
GCA-208ENST00000479199 RTBDNQ9BSG5 229 aaPredicted RBP8.51□□□□□ -1.05
GCA-208ENST00000479199 YTHDF2Q9Y5A9 579 aaKnown RBP8.51□□□□□ -1.05
GCA-208ENST00000479199 LOC102723971A0A1B0GUV8 181 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 NUP62P37198 522 aaPredicted RBP8.5□□□□□ -1.05
GCA-208ENST00000479199 PSMB3P49720 205 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 ZNF79Q15937 498 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 RNF212Q495C1 297 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 GPR107Q5VW38 600 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 MZT2AQ6P582 158 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 C7orf50Q9BRJ6 194 aaKnown RBP8.5□□□□□ -1.05
GCA-208ENST00000479199 GOLT1BQ9Y3E0 138 aa8.5□□□□□ -1.05
GCA-208ENST00000479199 IGKV1D-37A0A075B6S9 117 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 CRYM-AS1A6NIL9 109 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 ZFP92A6NM28 416 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 HBE1P02100 147 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 SULT1A3P0DMM9 295 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 SULT1A4P0DMN0 295 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 LYZP61626 148 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 ZNF90Q03938 601 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 OXA1LQ15070 435 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 FAM78BQ5VT40 261 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 OR8G2PQ6IF36 304 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 AP3S1Q92572 193 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
GCA-208ENST00000479199 NAA50Q9GZZ1 169 aaKnown RBP8.49□□□□□ -1.05
GCA-208ENST00000479199 ID1P41134 155 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 PAX9P55771 341 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 DAD1P61803 113 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 SUPT4H1P63272 117 aaKnown RBP8.48□□□□□ -1.05
GCA-208ENST00000479199 PSG9Q00887 426 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 TNP2Q05952 138 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 OR2F1Q13607 317 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 KLF9Q13886 244 aaPredicted RBP8.48□□□□□ -1.05
GCA-208ENST00000479199 NOXA1Q86UR1 476 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 LGI3Q8N145 548 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 OR4C16Q8NGL9 310 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 C20orf173Q96LM9 149 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 MRPS26Q9BYN8 205 aaKnown RBP8.48□□□□□ -1.05
GCA-208ENST00000479199 RBKSQ9H477 322 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
GCA-208ENST00000479199 A0A0J9YX75 114 aa8.47□□□□□ -1.05
GCA-208ENST00000479199 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
GCA-208ENST00000479199 GABARAPH6UMI1 98 aa8.47□□□□□ -1.05
GCA-208ENST00000479199 ISLRO14498 428 aa8.47□□□□□ -1.05
GCA-208ENST00000479199 GABARAPO95166 117 aa8.47□□□□□ -1.05
GCA-208ENST00000479199 GAMTQ14353 236 aa8.47□□□□□ -1.05
GCA-208ENST00000479199 SURF2Q15527 256 aaPredicted RBP8.47□□□□□ -1.05
GCA-208ENST00000479199 RRN3P1Q2M238 152 aa8.47□□□□□ -1.05
GCA-208ENST00000479199 EBLN2Q6P2I7 272 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 411.3 ms