RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 TMED4Q7Z7H5 227 aa16.57■□□□□ 0.24
C9orf3-216ENST00000478603 TRIM63Q969Q1 353 aa16.57■□□□□ 0.24
C9orf3-216ENST00000478603 FAM90A26D6RGX4 464 aa16.56■□□□□ 0.24
C9orf3-216ENST00000478603 SRPXP78539 464 aa16.56■□□□□ 0.24
C9orf3-216ENST00000478603 PYDC2Q56P42 97 aa16.56■□□□□ 0.24
C9orf3-216ENST00000478603 TMEM41BQ5BJD5 291 aa16.56■□□□□ 0.24
C9orf3-216ENST00000478603 LGALS9CQ6DKI2 356 aa16.56■□□□□ 0.24
C9orf3-216ENST00000478603 SIGLEC15Q6ZMC9 328 aa16.56■□□□□ 0.24
C9orf3-216ENST00000478603 FAUP35544 74 aaKnown RBP16.55■□□□□ 0.24
C9orf3-216ENST00000478603 RNF125Q96EQ8 232 aa16.55■□□□□ 0.24
C9orf3-216ENST00000478603 PBDC1Q9BVG4 233 aa16.55■□□□□ 0.24
C9orf3-216ENST00000478603 NRN1Q9NPD7 142 aa16.55■□□□□ 0.24
C9orf3-216ENST00000478603 X6R8D5 127 aa16.55■□□□□ 0.24
C9orf3-216ENST00000478603 ZNF705EA8MWA4 302 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-216ENST00000478603 ZNF90Q03938 601 aa16.54■□□□□ 0.24
C9orf3-216ENST00000478603 GAMTQ14353 236 aa16.54■□□□□ 0.24
C9orf3-216ENST00000478603 TOMM5Q8N4H5 51 aa16.54■□□□□ 0.24
C9orf3-216ENST00000478603 CSNK1G2-AS1Q8NCQ2 148 aa16.54■□□□□ 0.24
C9orf3-216ENST00000478603 C2CD4CQ8TF44 421 aa16.54■□□□□ 0.24
C9orf3-216ENST00000478603 V9GYH0 126 aa16.54■□□□□ 0.24
C9orf3-216ENST00000478603 FRAS1Q86XX4 4008 aa16.54■□□□□ 0.24
C9orf3-216ENST00000478603 IGKV1D-37A0A075B6S9 117 aa16.53■□□□□ 0.24
C9orf3-216ENST00000478603 ZFP92A6NM28 416 aa16.53■□□□□ 0.24
C9orf3-216ENST00000478603 PITX3O75364 302 aa16.53■□□□□ 0.24
C9orf3-216ENST00000478603 IAPPP10997 89 aa16.53■□□□□ 0.24
C9orf3-216ENST00000478603 MIFP14174 115 aa16.53■□□□□ 0.24
C9orf3-216ENST00000478603 SNRPD3P62318 126 aaKnown RBP16.53■□□□□ 0.24
C9orf3-216ENST00000478603 SLC35E1Q96K37 410 aa16.53■□□□□ 0.24
C9orf3-216ENST00000478603 ELOA3CA0A087WX78 387 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-216ENST00000478603 VAMP1P23763 118 aa16.52■□□□□ 0.24
C9orf3-216ENST00000478603 GPX4P36969 197 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-216ENST00000478603 ZNF79Q15937 498 aa16.52■□□□□ 0.24
C9orf3-216ENST00000478603 TMEM128Q5BJH2 165 aa16.52■□□□□ 0.24
C9orf3-216ENST00000478603 TBC1D24Q9ULP9 559 aa16.52■□□□□ 0.24
C9orf3-216ENST00000478603 VPS13DQ5THJ4 4388 aa16.51■□□□□ 0.23
C9orf3-216ENST00000478603 AP3S2P59780 193 aa16.51■□□□□ 0.23
C9orf3-216ENST00000478603 GSG1LQ6UXU4 331 aa16.51■□□□□ 0.23
C9orf3-216ENST00000478603 HRH4Q9H3N8 390 aa16.51■□□□□ 0.23
C9orf3-216ENST00000478603 PAIP2BQ9ULR5 123 aaKnown RBP16.51■□□□□ 0.23
C9orf3-216ENST00000478603 DUXBA0A1W2PPF3 345 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 IGLL5B9A064 214 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 H3BMM0 161 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 HLA-DMBP28068 263 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 ATP5IP56385 69 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-216ENST00000478603 DEFB1P60022 68 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 LYZP61626 148 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 OR2F1Q13607 317 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 SEPSECSQ9HD40 501 aaKnown RBP16.5■□□□□ 0.23
C9orf3-216ENST00000478603 XCL2Q9UBD3 114 aa16.5■□□□□ 0.23
C9orf3-216ENST00000478603 CCDC160A6NGH7 325 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 PRR20EP86478 221 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 PRR20CP86479 221 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 PRR20DP86480 221 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 PRR20BP86481 221 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 PRR20AP86496 221 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 OR8G2PQ6IF36 304 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 Q6ZTC4 211 aa16.49■□□□□ 0.23
C9orf3-216ENST00000478603 WDR12Q9GZL7 423 aaKnown RBP16.49■□□□□ 0.23
C9orf3-216ENST00000478603 C11orf94C9JXX5 98 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 RAB11AP62491 216 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 PPP1R1AQ13522 171 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 GDF5OSQ5U4N7 250 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 LRTM2Q8N967 370 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 MAGT1Q9H0U3 335 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 APLNQ9ULZ1 77 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 CELA1Q9UNI1 258 aa16.48■□□□□ 0.23
C9orf3-216ENST00000478603 DNAH10Q8IVF4 4471 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 PIGBOS1A0A0B4J2F0 54 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 SFT2D2O95562 160 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 HLA-DRB4P13762 266 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 S100A5P33763 92 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 NUP62P37198 522 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-216ENST00000478603 NUTF2P61970 127 aaKnown RBP16.47■□□□□ 0.23
C9orf3-216ENST00000478603 LINC00052Q96N35 136 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 SLC25A21Q9BQT8 299 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-216ENST00000478603 PFDN2Q9UHV9 154 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 HLA-DRB4X5D2U9 266 aa16.47■□□□□ 0.23
C9orf3-216ENST00000478603 IGKV1OR2-108A0A075B7D4 117 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 IGKV3-20P01619 116 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 HOXB5P09067 269 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 SLC25A6P12236 298 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 NKX2-1P43699 371 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-216ENST00000478603 ZNF767PQ75MW2 155 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 CCDC190Q86UF4 302 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 TRGV9Q99603 122 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 C1QTNF4Q9BXJ3 329 aa16.46■□□□□ 0.23
C9orf3-216ENST00000478603 SNRPGP15A8MWD9 76 aa16.45■□□□□ 0.22
C9orf3-216ENST00000478603 FABP1P07148 127 aa16.45■□□□□ 0.22
C9orf3-216ENST00000478603 TCTAP57738 103 aa16.45■□□□□ 0.22
C9orf3-216ENST00000478603 FXYD7P58549 80 aa16.45■□□□□ 0.22
C9orf3-216ENST00000478603 PPP1R14BQ96C90 147 aa16.45■□□□□ 0.22
C9orf3-216ENST00000478603 TMED3Q9Y3Q3 217 aa16.45■□□□□ 0.22
C9orf3-216ENST00000478603 TRAV10A0A0B4J240 114 aa16.44■□□□□ 0.22
C9orf3-216ENST00000478603 WRBO00258 174 aa16.44■□□□□ 0.22
C9orf3-216ENST00000478603 SYNGR2O43760 224 aa16.44■□□□□ 0.22
C9orf3-216ENST00000478603 MED6O75586 246 aa16.44■□□□□ 0.22
C9orf3-216ENST00000478603 GGNBP1Q5YKI7 109 aa16.44■□□□□ 0.22
C9orf3-216ENST00000478603 CENPSQ8N2Z9 138 aa16.44■□□□□ 0.22
C9orf3-216ENST00000478603 THAP8Q8NA92 274 aa16.44■□□□□ 0.22
C9orf3-216ENST00000478603 SOCS3O14543 225 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms