RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 KCNS1Q96KK3 526 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 AGMATQ9BSE5 352 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 PRSS22Q9GZN4 317 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 MINOS1-NBL1R4GNA1 71 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 OOSP1A8MZH6 123 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 PRB4P10163 310 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-208ENST00000478423 LYL1P12980 280 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 GATA4P43694 442 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 MLANAQ16655 118 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 C15orf32Q32M92 178 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 SPATA45Q537H7 98 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 COL25A1Q9BXS0 654 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-208ENST00000478423 YAE1D1Q9NRH1 226 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 WIPF3A6NGB9 483 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 TEX38Q6PEX7 206 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
NPHP4-208ENST00000478423 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 RNF5Q99942 180 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 PF4P02776 101 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 ABCA2Q9BZC7 2435 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 PMS2P5A8MQ11 134 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 ZNF56Q15929 161 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 A0A1B0GWJ7 208 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 K7EM74 188 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 CEACAM4O75871 244 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 TMEM50AO95807 157 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 TCF15Q12870 199 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
NPHP4-208ENST00000478423 M0R1W7 72 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 PRTN3P24158 256 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 B4DSR2 109 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 M0R3E3 92 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 AREGP15514 252 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
NPHP4-208ENST00000478423 PSG8Q9UQ74 426 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 FABP5P3A8MUU1 101 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 H3BUX3 64 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 OR1N2Q8NGR9 330 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 PRELID3AQ96N28 172 aa11.59□□□□□ -0.55
NPHP4-208ENST00000478423 IGLV3-9A0A075B6K5 115 aa11.58□□□□□ -0.55
NPHP4-208ENST00000478423 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.55
NPHP4-208ENST00000478423 ITGB1BP1O14713 200 aa11.58□□□□□ -0.55
NPHP4-208ENST00000478423 FER1L6-AS1Q8NA97 138 aa11.58□□□□□ -0.55
NPHP4-208ENST00000478423 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.55
NPHP4-208ENST00000478423 MOB4Q9Y3A3 225 aa11.58□□□□□ -0.55
NPHP4-208ENST00000478423 CA1P00915 261 aaPredicted RBP11.58□□□□□ -0.56
NPHP4-208ENST00000478423 ZNF25P17030 456 aaPredicted RBP11.58□□□□□ -0.56
NPHP4-208ENST00000478423 TMEM155Q4W5P6 130 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 DERL1Q9BUN8 251 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.56
NPHP4-208ENST00000478423 TRAV9-1A0A075B6T8 112 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 A0A1W2PRX2 142 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 IZUMO1RA6ND01 250 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 DDTP30046 118 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 GLMPQ8WWB7 406 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
NPHP4-208ENST00000478423 KIR2DL4Q99706 377 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
NPHP4-208ENST00000478423 CFHR2P36980 270 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 ASIPP42127 132 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 PAX8Q06710 450 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 C3orf36Q3SXR2 165 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 Q6AWC8 147 aa11.58□□□□□ -0.56
NPHP4-208ENST00000478423 A0A1W2PNU3 283 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-208ENST00000478423 A6NDN8 102 aa11.57□□□□□ -0.56
NPHP4-208ENST00000478423 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
NPHP4-208ENST00000478423 ITLN2Q8WWU7 325 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-208ENST00000478423 SNCGO76070 127 aa11.57□□□□□ -0.56
NPHP4-208ENST00000478423 C11orf44Q8N8P7 122 aa11.57□□□□□ -0.56
NPHP4-208ENST00000478423 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
NPHP4-208ENST00000478423 TBL2Q9Y4P3 447 aaKnown RBP11.57□□□□□ -0.56
NPHP4-208ENST00000478423 SOX21Q9Y651 276 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-208ENST00000478423 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
NPHP4-208ENST00000478423 C18orf15Q96N68 181 aa11.57□□□□□ -0.56
NPHP4-208ENST00000478423 SSBP4Q9BWG4 385 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-208ENST00000478423 NPFFO15130 113 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HOXA5P20719 270 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 PSMB2P49721 201 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 DSCR9P59020 149 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 C1QL4Q86Z23 238 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 Q8TCH9 128 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 SOD3P08294 240 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 NUTF2P61970 127 aaKnown RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 FBLL1A6NHQ2 334 aaKnown RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 APOHP02749 345 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 RPL13AP40429 203 aaKnown RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 EXOC3-AS1Q8N2X6 119 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 TRGV9Q99603 122 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 ZNF324O75467 553 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
NPHP4-208ENST00000478423 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms